Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MASWVLSECGIRPLPQIYTRPRTGHISNSKNNHSRIRFFHSNQSKTDLKFREPIGCSKERNWALKVSAPLRVEYGEEEERGEIINRVNGVEEQPEFDPGAPPPFKLADIRAAIPKHCWVKDPWRSMSYVVRDVVVVCGLAA |
1 | 6emkG | 0.06 | 0.06 | 2.52 | 0.94 | SPARKS-K | | SSLHYASYHGRYLICVYLIQLGHDKHELIKTFKGNTCVHMKGHEQTLHLLLQQFPRFINHRGENGRAPIHIACMNDYYQCLSLLIG-VGADLWVMDTNGDTPLHVCLEYGSISCMKMLLNEGDNVRDKGNWKPIDVAQTFE |
2 | 3gauA6 | 0.11 | 0.10 | 3.55 | 0.34 | FFAS-3D | | -----LKPCDYPDIKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDGWSPAVPCLRKCYFPYLENGYNQNHGRKFVQGKSIDVACHPGYALPK---AQTTVTCMENGWSPTPRCIR---------- |
3 | 5gn2A | 0.26 | 0.09 | 2.63 | 0.35 | HHpred | | --------------------------------------------------------------------------------------------LTEFDAGYG-EQPFRDLCANYPGAEYDPHDFREWGPIFRDRVLIVGQD- |
4 | 3k1qD1 | 0.11 | 0.11 | 3.82 | 0.77 | MUSTER | | MAQRQFFGLTYQPAPLFDLNDLQELAGCYARPWTSRFSHLAISTGSLPVWSARYPSVASRNIVVNTLLGAQITSHQGDPVLSSLAPVPAIQPPPVWAVAENVLLDSNN-----P--TYVLN-LSSMWPINQDVHIMTMWAL |
5 | 5g2bA | 0.14 | 0.04 | 1.21 | 0.60 | CNFpred | | ---------------------------------------------------------------------------------------------------------LLNFILQCRKK-YRNVPYHNFYHVVDVCQTIHTFLY |
6 | 5gn2A | 0.19 | 0.15 | 4.82 | 0.43 | HHsearch-2 | | MLPFRCANYGAEAYDPHDFRIEWGPIFHRLDGS--ARVLIVGQD-PAQH---------E----TIVRRILVGTA------GRRTQGKLGIVQSYVMVGGSKHK-NEPGIVDYRNK--WFKA---VLGPGNIEAVVSLGGLA |
7 | 6ic4A | 0.06 | 0.05 | 2.13 | 0.99 | Neff-PPAS | | VTRLATVTFDLDGKLTSFNAEQLKEVQKNALDEL-RYSSDYTQATPAQQKTMEQQLISNMNSITSIDEDAYIMVATNGLLGEKYLKIVPGGGLNYLKRGDTGTMDLEDLISK----------------------------- |
8 | 5mc9C | 0.13 | 0.05 | 1.72 | 0.53 | HHsearch | | --------------------------------DRKVSDLES-------------EARKQEAAI---------MDYNRDI-----AE---II--KDI-------HNLEDIKKTLPTGCFNTPSIE----------------- |
9 | 2kz7C | 0.11 | 0.06 | 2.29 | 0.75 | SP3 | | -----------------------GSWGCVRQEKRSSGLISELPSEEGRRLEHFTKLRPKRNKKQQPTQAAVCTISILPQDGEQNGLMGRVDEDEFFTKKVTGC-------------------------------------- |
10 | 1texA | 0.11 | 0.11 | 4.06 | 0.60 | PROSPECTOR2 | | DHPESLRATGVAGEPQEFFQYLPNTSMSPQPREWFADEDQSILRLLDPLIEGKPDLAPATIWGRTPNGVWGGKLMWNQTPLLVQRAKDLPDRSGSGRVWRRAEYHAGAIAHVITMLRAQEEGWRAWFYLWRNLTEVVGLPL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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