Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | VLLCFGVSHVQANDARLKQAYQNHQSDVQVRGSGLVSRLLPDDNKGSRHQKFILRLDSGQTLLVAHNIDLAPRIQGLRKGDRVEFYGEYEWNKKGGVMHWTHKDPRNHHAHGWLKHNGKIYE |
1 | 1nnxA | 0.17 | 0.13 | 4.30 | 0.93 | SPARKS-K | | QGGFSGPSGSVTTVESAK----SLRDDTWVTLRGNIVERISDD-------LYVFKDAS-GTINVDIDHKRWNGVT-VTPKDTVEIQGEVDKDWNSVEIDVKQIRKV---------------- |
2 | 4me3A3 | 0.22 | 0.12 | 3.89 | 0.69 | FFAS-3D | | ------------------RDIRSANIGTLISVSGIVRKNTEVFPKFIDVQKVEIQEDPPQRITIITEDDL---AGLLYPGNRVIVDGILR-------------------------------- |
3 | 1nnxA | 0.19 | 0.13 | 4.23 | 0.38 | HHpred | | --GGFSGPSG--SVTTVESAK-SLRDDTWVTLRGNIVERISDD-------LYVFKDASG-TINVDIDHKRWNGVT-VTPKDTVEIQGEVDKDWNSVEI------------------------ |
4 | 5f7cA | 0.13 | 0.12 | 4.27 | 0.59 | MUSTER | | CVTVPFQKQLLANDMVADTAVPREEYTLIIRQYNIITRLFLGFGEYEI-----LFTQDGTRAVINVEEPALDRWSELLPDPQETLDITLY-PDGKREIRLAAYDHFSPPRYAFCKRTGKKER |
5 | 3au7A | 0.18 | 0.16 | 5.35 | 0.95 | CNFpred | | RRMIFVTNHATDMHLIGEEEVHRLENYRSYRLRGRVTLEPYDI---GGHVFFEIDTK-FGSVKCAAFKQFRNVIRLLRKGDVVEVYGSMKK----DTINLEKIQI-RELQPGFYEVPPSARR |
6 | 1nnxA | 0.17 | 0.13 | 4.30 | 0.62 | HHsearch-2 | | -QG--GFSGPSGSVTTVESAK-SLRDDTWVTLRGNIVERISDD-------LYVFKDASGT-INVDIDHKRWNGVT-VTPKDTVEIQGEVDKDWNSVEIDVKQIR-----------KV----- |
7 | 1nnxA | 0.17 | 0.12 | 4.03 | 0.82 | Neff-PPAS | | ---------PSGSVTTVESAKSLR-DDTWVTLRGNIVERISDD-------LYVFKDASG-TINVDIDHKRWNGVT-VTPKDTVEIQGEVDKDWNSVEIDVKQIRKV---------------- |
8 | 1nnxA | 0.16 | 0.12 | 4.07 | 0.77 | HHsearch | | -QGGFS--GPSGSVTTVESAKS-LRDDTWVTLRGNIVERISDD-------LYVFKDASGT-INVDDHKRWN-GVT-VTPKDTVEIQGEVDKDWNSVEIDVKQI-----------RKV----- |
9 | 5vl1A1 | 0.17 | 0.15 | 4.83 | 0.84 | SP3 | | V-----AIERTHTLAEIRATYADLPTDSIVGVAGRVVFA----RNTGKLCFATLQDGDGTQLQAMISLDEVGRKADVDIGDVVYVHGTVISSRRGEADSWRMAAKALRPLPV---------- |
10 | 2k50A | 0.10 | 0.08 | 3.07 | 0.58 | PROSPECTOR2 | | M-------KPEHRMDTI----SKLEEGAETPVTGRVMKISSTTRKGREGKLANVIIADTGELRAVFWTENIKLLKKFREGDVIRIKDVNIRGGFGGRKEAHLMPRST------VEVLDPLEH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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