Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | VPVPMPDLALPASFDSDNPTHRYRSLDSSNPWLVRPVLDTHGWDHDVGYEGINVERLFVAKKKFPISFSGQVTKDKRDANVQMELASSLKHGEGKATSVGFDMQTVGKDLAYTLRSETRFSNLKKNKATAGISVTLLGDALSAGVKFEDKLIANKQFQVVMTGGAMTGRGDLAYGGSLEAQLRDKDYPLGCSLSTLGLSIMDWHGDLAIGCNIQSQVPVGRSTNLIARANLNNKGAGQVSLRINSSEQLQVALIAVLPLLKKLFE |
1 | 2yfnA | 0.10 | 0.07 | 2.49 | 1.20 | CNFpred | | -----------------------------------------------------------------QTLEIVLADE--NAQVEVHLLYGVLEE-NDVITRSVRIKNTGGQITIEKAAAACLDFV-----QGEFDVLRFYG-AMERNLERTPLGH-GTIAFGSRRGTSSHQ------YNPAVILAEKGTTET-AGSCYGMLFV-------YSGNFSCEAEKDQFNQTRLLLGLNE-TVPEVILSYSA-EGLSALSQQYHNCIRNHVC |
2 | 4es8A | 0.10 | 0.09 | 3.48 | 1.02 | PROSPECTOR2 | | EELPDDLMNFKGTWEVSADGSRFFSKGATDSYVFHLIVKKPGWREHNEVKDSYIKIAARYKTSTTVAFKVNTKSLIKDHDYKITFEQGQIASG---ITVDYRIGSAFNKYASNVKIEGEEQGFKQREQGDKTISFRTLKEGPMSLVLLSKVKPQGDLDVEFKNLKIIDVTNVAYVGNKNVQLTLKSDDGRTNFEGDEISLFNSRGELLQTVTVTKDQQLKNKEKLKVSIKQKQSKDFFFEVGIDPKVE---------------AK |
3 | 4es8A | 0.11 | 0.11 | 3.80 | 0.86 | SPARKS-K | | EELPDDLMNFKGTWEADGSSGRFFSKGATDSYVFHLIPKPGWREHN---------------EVKDSYIKIIAARYKTSTTAPYSVAFKVNTKSDHDYKITFEQGQIASGITVDYRIGSAFNKTTDDSFYASNVKIEGEEQGFKQRKTISFRTLKEGPMSLVLLSKVEKKDLDVEFKNLKIIDVTNPSQVGNKNVQLTLKRTNFEGDEISLFNLQTVVTKDQQNPISITLSLKNKEKLKVSIKQKQSKKTSKDFFFEVGIDPKVEA |
4 | 5o8oA | 0.11 | 0.09 | 3.40 | 0.80 | FFAS-3D | | ------------AMGERLNPYAFAALYGTNQIFAQGNLDNEG--------ALSTRFNYRWGDRTITKTQFSIGGGQDMAQFEHEASLKAINPSFTGIFVGDYLQAVTPRLGLGLQAVWQRQGLTQGPDTASYFARYKAGDWVASAQLQA----QGALNTSF---WKKLTDRVQAGVDMTLSVAPSQMGGLTKEGITTFGAKYDFRMSTFRAQIDSKGKLSAPVTLTFAADVDHVTQGSVSIEASDVDLQEQQ------------- |
5 | 6h3iF | 0.07 | 0.05 | 2.02 | 0.27 | HHpred | | ------------------------------------QWNPAKYAFAEDAQGLSISYT----PYLT------------DIS--L-GQVTYYNKINDRSAFAGSFRYFGG-IELR---E-PTREVNPNEFALDG---------SYSLKLSETFSMAVAARYIRS--NLKVSAAGSFAVDVAGFYQSEEIAYSNGRWRAGFNIQNLGPKISYDHDDLSANFLPANLRVGGGFDFIFDDKLGVSLELTKLDEANYKKY----------- |
6 | 4es8A | 0.14 | 0.13 | 4.51 | 0.74 | MUSTER | | LPDDLMNFKGTWEVSADGSSGRFFSKGATDSYVFHLIVKKPGW-HNEVKDSIAARYKTSTTAPYSVAFKVNTKSLIKDHDYKITFEQGQIASG---ITVDYRIGSAFNKYASNVKIEGEEQGFKQREGDKTISFRTLKEGLVLLSKVEDLDVEFKNLKIIDVTNPSQLDKGVAYNKNVQLTLKSDDG--RTNFEGDEISLFNSRGELLQTVTVTK----DQQNPISITLSLKNKEKLKVSIKQKQSKKTS----FFFEVGIDPKV |
7 | 4fnrA | 0.10 | 0.06 | 2.40 | 1.15 | CNFpred | | ----------------------------------------------------------------AETLEIVLGDA--LIGLEVTLQYTAYEK-WNVITRSARFENKGGERLKLLRALSMSVDFP--TADYDWIHLPGA--GRERWIERRPLVT-GVQAAESRRGASSH------QQNPFIALVAKNADEH-QGEVYGFSFVY-SGNFLAQIEVDQ------FGTARVSMGINP-QTPEVVMVYSD-QGLNGMSQTYHELYRTRLA |
8 | 5mu1A6 | 0.14 | 0.07 | 2.43 | 0.42 | HHsearch-2 | | HAEVARSDLPQGIFDN-APTVRFKQWNSTYTIFFVAVINPASEIGQ---RWVAVL--KVLSELEGVHLRVFLNPTKRFYRYVLSSSPSFTGPRETLLVVGMDVPPAW--LVTSKVAVDDLDNLRIKDIKAHVEAIYELEH----------------------------------------------------------------------------------------------------------------------------- |
9 | 4es8A | 0.09 | 0.09 | 3.29 | 0.89 | Neff-PPAS | | LPDDLMNFKGTWEVSADGSSGRFFSKGATDSYVFHLIPAKDVKKPGWREHNEVKDSYIKIDKQ---SIAARYKTSTTAPYSVAFKVNTKSLIKDHDYKITFEQGQIASGITVDYRIGSAFNKTTDDS-----FKISDESKYASNVKIEGEEQGFKQREQGDKTISFRTLKEGPMSLVLLSKVEKK----PQGDLDVEFKNLKII-DVTNPSQLDKGVAYVGNKNVQLTLKSDDGRLQTVTVTKDQQNPISITLS--EDQAKSLKN |
10 | 1vt4I3 | 0.18 | 0.09 | 2.94 | 0.90 | HHsearch | | YASIVDHYNIPKTFDSDDPPYLDQYFY----------------SHIHHLK--NIEHRMTLFRMVFLDFRFLEQKIRHDST--------------AWNASGSILNTLQQLKFYKPYICDNDPKYERLV------NAILDF----LPKIEENLICSK--------------------------------------------------------------------------------------------YTDLLRIALMAEDEAIF- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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