Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | RDASEEEIRSARNFLIQQYAGHEPSEEAIEGAYEKIIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPPMDIISRRLFFFAFIAGWSIATSAENGPAFQLAISLFSCIYFLNDKMKNLMRASTTGFGVLVGGWIIGSLLVPLIPTFIIPPSWSLELLTSLVAYVFLFLGCTFL |
1 | 3o7pA2 | 0.10 | 0.10 | 3.66 | 0.83 | SPARKS-K | | KQGSFSASLSRLARHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIP-GMT-AGFAANYLTGTMVCFFIGRFTGTFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMTIFSLGIKNQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGN---IPTAELIPALCFAVIFIFARFR |
2 | 5lilA3 | 0.11 | 0.10 | 3.62 | 0.99 | FFAS-3D | | ---SKDQLMEAFRMSVSAIVASLLTMLGIIIGITSVVSVVALGNGS----QQKILENIRGIGDTIKQTIENTTGTMKISSIAFISLIVGGIGVMNIMLVSVTERTKEIGVRMAINILQQF-----LIEAVLICLIGGVAGILLSVLIGVLFNSFITDFSMDASIVTAVLFSTLIGVLFGYM |
3 | 5lilA3 | 0.11 | 0.10 | 3.80 | 0.85 | MUSTER | | KDQLMEAFRMSVSAIVAHKMRSLLTMLGIIIGITSVVSVVALGNGSQQ-KILENIRGIGDTIKQTIENTTGTMKL--ISSIAFISLIVGGIGVMNIML-TERTKEIGVRMAIGARQINILQQ--FLIEAVLICLIGGVAGILLSVLIGVLFNSFIFSMDFSASIVTAVLFSTLIGVLFGYM |
4 | 3rkoB | 0.05 | 0.04 | 2.03 | 0.87 | CNFpred | | -------FREMVELAPAHFADGN---NMLMWATLMLLGGAVGKSAQL--------------LQTWLADAMAGPTPLIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVTDIKRVLAYSTMSQIGYMFLALGVQAWDAAI-----FHLMTHAFFKALLFLASGSVI |
5 | 2ys8A | 0.17 | 0.04 | 1.45 | 0.67 | HHsearch-2 | | PGASRDEVNKAYRKLAVLLHPDEDAFKAVVNARTALLKNIKSGPSSG-------------------------------------------------------------------------------------------------------------------------------------- |
6 | 5cwqA | 0.08 | 0.08 | 3.23 | 0.93 | Neff-PPAS | | -EEAERRLQEARKRSEEAREDLKELAEALIEEARAVQELARVACERGNSEEAERASEKAQRVLEEARKVSEEARDDEVLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVK |
7 | 2guzF | 0.20 | 0.05 | 1.59 | 0.74 | HHsearch | | ESLNMDKINNRFNYLFEVNDGSFYLQSKVYRAAERLKWE-LAQREK--------------------------------------------------------------------------------------------------------------------------------------- |
8 | 6mjpG3 | 0.11 | 0.08 | 2.77 | 0.72 | SP3 | | -------------------------------------------------SLAPDKLAVVTVKPEELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFG----PLRSVTMGARILSGVIAGFSFYISSEFFGPLSLVYG----LPPLFGALAPSLVFLAIALGLL |
9 | 5cwpA | 0.08 | 0.08 | 3.09 | 0.82 | PROSPECTOR2 | | MSSDEEEARELIERAAAERTGDPRVRELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELALVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSSEEVNEALKKIVKAIQEAVESLR |
10 | 2l6lA | 0.14 | 0.03 | 1.14 | 0.46 | FFAS03 | | PSANISDLKQKYQKLILMYHPDKQKFIEIDQAWKILGNEETKRE----------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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