Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | RMAACVPSPHIQVEVIERLSETSVAVLWQDATRCRYDDQVWISCRARQKGYCALSGAVIRRDDLIYKPRVRASMPANAAAMILASVVEQM |
1 | 3isyA | 0.05 | 0.04 | 2.18 | 0.84 | SPARKS-K | | SIDAIQEPEQIKFNSLKNQSERAIEFQFSTGQKFELHKERYRYSKEKFTQA--FQNLTLESGETYFSDVWKEVPEPGTYEVKVTFKGRAE |
2 | 1lm8V | 0.16 | 0.14 | 4.81 | 0.45 | FFAS-3D | | -LRSVNSREPSQVIFCNR-SPRVVLPVWLNFDGESYRGHLWLFRDAGTHDGLLVNQT------ELFVPSLNVDLPVYTLKERCLQVVRSL |
3 | 2y0oA | 0.08 | 0.07 | 2.66 | 0.22 | HHpred | | -----VNTDRYCSKELVLFPGQTCPEHRHPPVDGQEGQETFRCRYG--KVYLYVEGEELEPGGQYTIPPNTKHWFQAGGAVVTE------ |
4 | 5c2vB2 | 0.13 | 0.12 | 4.27 | 0.66 | MUSTER | | CEAENGQVFTNNVTIIETKAGGKVARLPLDDLNNYDGN-PYGMAMDPKGKYLYIGVR--GMHRTILDMDKVLGLVRSSTQEELDYLRDDL |
5 | 2bs2A | 0.15 | 0.11 | 3.76 | 0.69 | CNFpred | | ---------KEAIALIHQD-GKCYGAVVRDLV-----TGDIIAYVAK--GTLIATGGYG----RIYKNTTN-AVVCEGTGTAIALETGIA |
6 | 6i6rA2 | 0.10 | 0.09 | 3.26 | 0.50 | HHsearch-2 | | ARPEKPPGQVTRLRALP-LTQGQLVLVWSDESKCLWTYEIQFSQ----------AYTPVSRKPSTFNLFVFSPDTVSGSYR--VRALDYW |
7 | 1qwrA2 | 0.11 | 0.10 | 3.64 | 0.86 | Neff-PPAS | | -DESTESRKGITIKTFVQGEYFSVYKWDINGEAEAQDESFLICSVIEGSGLLKYEDCPLKKGDHFILPAQPDFTIKGTCTLIVSHI---- |
8 | 2v5yA2 | 0.10 | 0.09 | 3.28 | 0.23 | HHsearch | | CADP--MRGPRKLEVVE-VKSRQITIRWEPFGYNVYNLTVHYCYQVNSHPQHTITNLS--P-YTNVSVKLI---LMNPEGELIVQTDE-- |
9 | 2cumA | 0.13 | 0.11 | 3.83 | 1.16 | SP3 | | SSGSSGLEAPRDLEAKEV-TPRTALLTWTEPPVRGYGGQTQEILLPGGITSHQLLGL--FPSTSFTTGGLRISGPSSG------------ |
10 | 2cumA | 0.09 | 0.08 | 2.97 | 0.47 | PROSPECTOR2 | | GSSGSSGLEAPRDLEAKEVTPRTALLTWTEPPVRTPGGQTQEILLPGGITSHQLLGLFLQLLPSFTTGGLRISGPSSG------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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