Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | HAQQDAQFTQYMYNTININPAYAGSRGAMSIFGLYRTQWVGLDGAPETSSFSLNTPLNNSNLGLGVSLVNDKIGPTNENTFSADLSYTVPTSETFKLSFGIKATANLFNLDIGKLNPEQQGDPQFQDLNSKFTPNIGAGVYWHSDKAYIGLSVPNFIETNRYNDNDIAIFKDKINYYLIAGYVFDLDPYIKFKPAVLTKMVEGSPLQVDLSANFMFNDKFVAGVAYRWSAALSAMVGFQVSDGLYLGYAYDRETTRLNNYNSGSHEIFLRF |
1 | 6h3iF | 0.16 | 0.15 | 5.13 | 1.43 | SPARKS-K | | GLGDQGVATSSDVFSQQWNPAKYAFAEDQGLSISYTPYLTDI----SLGQVTYYNKINDRAFAGSFRYFGFGTREVNPNEFALDGSYSLKLSE--TFSMAVAARYIRSNLKVATEEIDAS---------AAGSFAVDVAGFYQSEEWRAGFNIQNLGPKISYDHDDLSANFLPANLRVGGGFDFIFDDYNKLGVSLELTKLELKEITYSAAAEYMYQDAFAMRLGYYHESFFSLGAGFKY-SMIKVDVSYLFSASKVKNPLENTLRFSLTF |
2 | 6h3iF | 0.18 | 0.16 | 5.28 | 1.82 | FFAS-3D | | -------------FSQQWNPAKYAFAEDAQGLSISYTPY---LTDISLGQVTYYNKIND-RSAFAGSFRYEPTREVNPNEFALDGSYSLKLSET--FSMAVAARYIRSNLKVATEEI---------DASAAGSFAVDVAGFYQSERWRAGFNIQNLGPKISYDHDDLSANFLPANLRVGGGFDFIFDDYNKLGVSLELTKLELKEITYSAAAEYMYQDAFAMRLGYYHESFFSLGAGFKY-SMIKVDVSYLFSASKVKNPLENTLRFSLTF |
3 | 6h3iF | 0.17 | 0.15 | 5.08 | 2.30 | HHpred | | ---------SSDVFSQQWNPAKYAFAEAQGLSISYTPYLTDI----SLGQVTYYNKIND-RSAFAGSFRYFGFGGVNEFALDGSYSLK--LSE--TFSMAVAARYIRSNLKVATEE---------IDASAAGSFAVDVAGFYQSGRWRAGFNIQNLGP-KISYDHDLSANFLPANLRVGGGFDFIFDDYNKLGVSLELTKLLVKEITYSAAAEYMYQDAFAMRLGYYHEQFFSLGAGFKYS-MIKVDVSYLFSASKVKNPLENTLRFSLTF |
4 | 6h3iF | 0.18 | 0.17 | 5.39 | 1.62 | MUSTER | | VATSS-------VFSQQWNPAKYAFAEAQGLSISYTPYLTDI----SLGQVTYYNKIND-RSAFAGSFRYFGTREVNPNEFALDGSYSLKLSET--FSMAVAARYIRSNLKVAT---------EEIDASAAGSFAVDVAGFYQSEEWRAGFNIQNLGPKISYDHDDLSANFLPANLRVGGGFDFIFDDYNKLGVSLELTKLLLKEITYSAAAEYMYQDAFAMRLGYYHESFFSLGAGFKY-SMIKVDVSYLFSASKVKNPLENTLRFSLTF |
5 | 2r89A | 0.12 | 0.11 | 3.88 | 2.05 | CNFpred | | --------------NVSRNPALITMFDRPTFSAGAVYIDPDVN-TAWVPNMHFVAPIN-DQFGWGASITSN-GGTTDLETMNLNLSGAYRLN--NAWSFGLGFNAVYARAKIERFAGDDSNTKTAHLNGNQWGFGWNAGILYELDNNRYALTYRSEVKIDF------LTLNLPEMWEVSGYNRVDP--QWAIHYSLAYTSW--DAYRIALGTTYYYDDNWTFRTGIAFDFWLSAGTTYAFNKDASVDVGVSYMHGQSVKINEYQFESEGKA |
6 | 6h3iF | 0.17 | 0.16 | 5.21 | 3.19 | HHsearch-2 | | LGDQGVATS-SDVFSQQWNPAKYAFAEAQGLSISYTPYLTDI----SLGQVTYYNKIND-RSAFAGSFRYFGFGGVNEFALDGSYSLK--LSE--TFSMAVAARYIRSNLKVATEE---------IDASAAGSFAVDVAGFYQSGRWRAGFNIQNLGP-KISYDHDLSANFLPANLRVGGGFDFIFDDYNKLGVSLELTKLLVKEITYSAAAEYMYQDAFAMRLGYYHEQFFSLGAGFKYS-MIKVDVSYLFSASKVKNPLENTLRFSLTF |
7 | 6h3iF | 0.19 | 0.17 | 5.38 | 2.16 | Neff-PPAS | | ------------VFSQQWNPAKYAAEDAQGLSISYTPYL----TDISLGQVTYYNKIND-RSAFAGSFRYFGFGEVNPNEFALDGSYSLKLSET--FSMAVAARYIRSNLKVAT---------EEIDASAAGSFAVDVAGFYQSERWRAGFNIQNLGPKISYDHDDLSANFLPANLRVGGGFDFIFDDYNKLGVSLELTKLLLKEITYSAAAEYMYQDAFAMRLGYYHEQFFSLGAGFKY-SMIKVDVSYLFSASKVKNPLENTLRFSLTF |
8 | 6h3iF | 0.17 | 0.15 | 5.10 | 4.15 | HHsearch | | LGDQGVAT-SSDVFSQQWNPAKYAFAEAQGLSISYTPYLTD----ISLGQVTYYNKIND-RSAFAGSFRYFGFGEVNEFALDGSYSLKL--SE--TFSMAVAARYIRSNLKVATEE---------IDASAAGSFAVDVAGFYQSGRWRAGFNIQNLGP-KISYDHDLSANFLPANLRVGGGFDFIFDDYNKLGVSLELTKLLVKEITYSAAAEYMYQDAFAMRLGYYHEQFFSLGAGFKYS-MIKVDVSYLFSASKVKNPLENTLRFSLT- |
9 | 6h3iF | 0.17 | 0.16 | 5.32 | 1.82 | PROSPECTOR2 | | DIERPITTGPFLVFSQQWNPAKYAFAEDQGLSISYTPYLTDI----SLGQVTYYNKINDR-SAFAGSFRYEPTREVNPNEFALDGSYSLKLSET--FSMAVAARYIRSNLKVATEEIDASAA---------GSFAVDVAGFYQSEEWRAGFNIQNLGPKISYDHDDLSANFLPANLRVGGGFDFIFDDYNKLGVSLELTKAELKEITYSAAAEYMYQDAFAMRLGYYHESFFSLGAGFKYS-MIKVDVSYLFSASKVKNPLENTLRFSLTF |
10 | 6h3iF | 0.19 | 0.17 | 5.37 | 1.83 | SAM | | ------------VFSQQWNPAKYAFAEAQGLSISYTPYLTDIS----LGQVTYYNKIND-RSAFAGSFRYFGFGGINPNEFALDGSYSLKLSE--TFSMAVAARYIRSNLKVATEE---------IDASAAGSFAVDVAGFYQSGRWRAGFNIQNLGP-KISYDHDLSANFLPANLRVGGGFDFIFDDYNKLGVSLELTKLLVPEITYSAAAEYMYQDAFAMRLGYYHEQFFSLGAGFKYS-MIKVDVSYLFSASKVKNPLENTLRFSLTF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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