Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MERSRSPRETGSTSSRDKSDADWSERRREERTRTWKSRSPIRARGERSWGSWRSREKNQSSSTASRPYQKATRKETATKKTKHTPFNVFSAHRALSKTDLQFCGFYWHSTRLASKGTNEIFNGLKQSFQSKAIDGKLDWEGVRELLFEQKKCLDTWYRNMMYHFALGGDCEKCNYWDDVYKKHLANVDTYSVAEEITDSEMLEAAEAVDAANQ |
1 | 3rmrA | 0.13 | 0.12 | 4.09 | 0.74 | SPARKS-K | | LIETIDRHGRVSLNDEAKKKVVRTWKKLIEEIGKHYFEAPGHDTYDEALATLVTTYSDRGVARATRPSDPLSKKAGQAHRLEEAVASLWKGRGYTS---------DNVVSSIATGHDVDFFAPTAFTFLVKCVESE---DDANNAIFEYFGSNPSRYFSAVLHAEKPDALESSKKWTPVFERTLAAYQYE----KLSLSQIEELVEEYSRIYS |
2 | 1rw2A | 0.10 | 0.07 | 2.44 | 0.72 | FFAS-3D | | ---------------------------------------------------HHHHHKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRVLVKQKKAS-----------------FEEASNQLINHIEQFLDTETPYFMKSIDCIRAFREEAIQRFNNFLKALQEKVEIQLNHFWEIVVQDGITLITKEESGSSVTAEEAKKFLAPKD---- |
3 | 2b5dX | 0.13 | 0.10 | 3.40 | 0.32 | HHpred | | ---------------------------------------VRINTGIKYHRITSKSYDKSQMDIMGVEPDEGVFFLESKDLKLVTASEVIDTLEEVQIATPADS--SWGA------TNDWIYRHLHEMIIDLSKKYYNSSDP------LVERVLNQMLRELFWAFIMTT-RTSVQYAENRTKLHIKRFLNLYVSGRI-DEEMLRYYEWTDAIF- |
4 | 4bjmA | 0.12 | 0.11 | 3.99 | 0.70 | MUSTER | | FDRGFLRPFGAKMKFLKPDQQKLSTDDL-EKDKNVRDDAKQDSTKNGTPEIKQKYDKAYEKTKAAAEKLVSEESLTRDALLELTEEQYVEKAALFDKDVYRNNLQRQTYERLLRSETDVSYREVARTFIAREGEPALNIERLALTLLDYLAIAADFLKNQANLHAD----------DPELNLYKAETKAREIKANRAMKEALEGADKLFERNK |
5 | 4p5wA | 0.06 | 0.03 | 1.44 | 0.51 | CNFpred | | ------------------------------------------------------------------------------------AKQAFVQRDNARTGRVTAIDFRDIMVTIRPHVLTPFVEECLVAAAGGTTSHQVSFSYFNGFNSLLN--NMELIRKIYSTLAGT----DVEVTKEEFVLAAQ------KFGQVTPMEVDILFQLADLYEP |
6 | 2pffB | 0.13 | 0.11 | 3.73 | 0.80 | HHsearch-2 | | MDA------------YSTRPL------------------------TLSHGSLEHVLVTASFFIASQLQEQFNKILPEADDEPTTPAELVGKFLGYSLVEPSKVGQFDQVLLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYIRPFDKKSNSALFRAVFGGQGNTDDYFEDLYQ--TYHVLVG-DLIKFSAETLSELIRTTLDAEK |
7 | 5nnvA | 0.07 | 0.06 | 2.54 | 0.71 | Neff-PPAS | | -----------------------KEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSN-ELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKTIE |
8 | 4jleA | 0.11 | 0.06 | 2.20 | 0.43 | HHsearch | | ----------------------------------------------------------------------------------YTAEEIN-EMINEFINRNDMNIIFSYVHESEREKFKKVEENIFKFIQSIVETYKIPFKFAHFEMQGYALKQEKFLLEYAFLSLNGKLCERKKFWIEFRKS-MFDV----------WKEKLASFREHGEMN- |
9 | 4bjmA | 0.13 | 0.12 | 4.25 | 0.66 | SP3 | | LRPFGAKMKFLKPDQVQKLSTDDLITYMAEKDKNVRDLAIKLRDAKQDSTKNGTPEIKQKYDKAYEKTKAAAEKLVSEESLELTEEQYVEKAALFDKDVYRNNLQRQTYERLLRSETDVSYREVARTFIAREGEPALNIERLALTLLDYLAIAADFLKNQANLHAD----------DPELNLYKAETKAREIKANRAMKEALEGADKLFERNK |
10 | 1texA | 0.06 | 0.06 | 2.43 | 0.76 | PROSPECTOR2 | | DHPGVAGEPQEFFQYLPNTSMSPQPREW--------FADEDQSILRLLDPLIEGKPDLAPATIWRDYIQTVGRTPNGVWGGKLMWNQTPLLVQRAKDLPDRSGSGLLSAIRDVVGSVSQAVSFWRAVQTRVWRRAEYHAGAIAHVITMLRAQEEGWRA---WFTEENVEPIDVDYLTEVVGTVLEDPRLAEWVERYRDQR--------DGLPL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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