>PF11685 (267 residues) KKKLLIGTAILSSAAILGSCGKSETATELRIVDQCNTANDLCKFELTDALVSRYTNLLGK TIERIESQTPLQAIQGTITWNTPAGATLATNTDVVTQLGSGCQNDSCTANANPTAFNLQV GSNSISVSGTITVNGKTVNLASTVPPVTVDTIQVADSHVFQSGTLPAGLTIGDLVTNLNI NARDAHGTFSEQNGTLKITCETGYEWIDDQDPPFGSFTTASTSRSVAMSSWLRETNSWIN GAQPNFSLTQNGVSNTVSYTWIAGCWQ |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | KKKLLIGTAILSSAAILGSCGKSETATELRIVDQCNTANDLCKFELTDALVSRYTNLLGKTIERIESQTPLQAIQGTITWNTPAGATLATNTDVVTQLGSGCQNDSCTANANPTAFNLQVGSNSISVSGTITVNGKTVNLASTVPPVTVDTIQVADSHVFQSGTLPAGLTIGDLVTNLNINARDAHGTFSEQNGTLKITCETGYEWIDDQDPPFGSFTTASTSRSVAMSSWLRETNSWINGAQPNFSLTQNGVSNTVSYTWIAGCWQ | |||||||||||||||||||
1 | 5o9zL | 0.09 | 0.08 | 3.12 | 0.81 | SPARKS-K | YPDGSKEKRRAAIAQALAGEVSQLSRHIKFGQKSFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKAQDNFMMMDDAVMCFSRDTEMLATG----------AQDGKIKIQSGQCLRRFERAHKGV-TCLSFSKDSSQILSASFDQTIRIHGLKGKTLKEFRGHS-----------------SFVNEATFTQDGHYIISASSDGKIWNMKTTECSNTFKSLGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKRE | |||||||||||||
2 | 3weaA | 0.14 | 0.06 | 2.16 | 0.44 | FFAS-3D | -----------------EDCGSEVGKFSDIIISSCDPSEEKCSI------------IRESEIHKFTPSVDVKNVEAKAFGVLLD----------VPVPFPLKKPEICKDPDSGVKCPLKKDVEI-----EYKV---TFFVEKATPALSLEIM----------------------------------WEFRNEKDE-KITC------------------------------------------------------------------- | |||||||||||||
3 | 5xbjA2 | 0.18 | 0.07 | 2.45 | 0.33 | HHpred | ------------------------------------------------------------------------------------------------------------LKGDNYDRTIQPGSFDIVI----YDKGDKKLT-KTI--------T------I-----DVNTTMNDIMRQINANTDDDHINASYDAGLFQINAKSGFKVAIEDK---GTNFAGAFS----IGGFSGTDASDMKVDLNDPSTVRASS-------------- | |||||||||||||
4 | 2ivzD2 | 0.12 | 0.10 | 3.59 | 0.64 | MUSTER | -TRIAYVV--------------QTFPYELRVSDY-DGYNQ---FVVHRSP-QPLMSP-GSKLAYVTFESG----RSALVIQTLANGAV----RQVASFPRHNGAPAFSPDGS--AFALSKGSLNLYVMDL---SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVPQRITWEGSQNQADVSSDGKFMVMVSSQHAKQ----DLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVTDGRFPATDGQVKFPAWS | |||||||||||||
5 | 3f1vA | 0.07 | 0.04 | 1.83 | 1.11 | CNFpred | --VIVPRKGVIELMRMLDG-----GDNPLRVQIGS----NNIRAHVGDF--IFTSKLVDGRFPDYRRVLPK-NPDKHLEAGCD------LLKQAFARAAILSNEK-------FRGVRLYVSENQLKITANNEEAEEILDVTYSGAEMEIGFNVS---------------YVLDVLNALK--CENVRMMLTDSVSSVQIEDAQSAAYVV----------------------------------------------------------- | |||||||||||||
6 | 4npgA1 | 0.15 | 0.04 | 1.52 | 0.42 | HHsearch-2 | ------------------------------------------------------------------------PITVDVYLDITVE-NISTLKDLTVKFDNY--DLHYVKTDNSVKVGIIPGIYSVTVSGTAIDENNEAALFKHGSALNIEVQGLK---V------------------------------------------------------------------------------------------------------------ | |||||||||||||
7 | 5njlA | 0.12 | 0.12 | 4.12 | 0.83 | Neff-PPAS | -TELVSKVRDLMSQKYTGGSQVGQPIYEIKVGETLSKLKIITNIDELEKLVNALGE--NKELIVTITDKGHITNSANEVVA-EATEKYENSADLSAEANSITEKAKTETNGIYKVADVKASYDSAKDKLVITLRDKTDTVTSKTIEIGIGDEKIDANPVDSTGTNLDPSTEGFRVNKIVKLGVAGAKNIDDVQLAEITIKNSDLNTVSPQDLYDGYRLTVKGNMVANGTSKSISDISSKDSETGKYKFTIKYTDASGKAIELTVEST | |||||||||||||
8 | 3zd2A1 | 0.11 | 0.02 | 0.81 | 0.41 | HHsearch | -------------------------------------------------------------------------------------------------------------------------------------------------------EATFC----DFP-------------------KINHGILYPTGEVFYYSCEYNFVSPSK-------S---FW--TR--ITCTEE-G-WSPTP-----KCL----------------- | |||||||||||||
9 | 2j8sA | 0.09 | 0.09 | 3.38 | 0.74 | SP3 | STGRYLVLYLIIVVGMAYLFVRDEDQGVFMTMVQLPAGATQ---ERTQKVLNEVTHYYKNNVESVFAVNGFGFATGIAFVSLKDPGEENKVEAITMRAIKDANLPAIVELGTATGFDFQAGLGHEKLTQARKHPDMLTSVRPNGLEDTPQFKIDIDQEKAQALGVSIN-DINTTLGAAWGGSYV--NDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQMVPF----SAFSSSRWEYGSPRLERYNGLP---SMEILGQAAP | |||||||||||||
10 | 4jx0A | 0.08 | 0.08 | 3.06 | 0.84 | PROSPECTOR2 | KYIEEDIREQLGIAINDLVNTTLVGKNELSFKVKVTKPYKEIKVNLKEDKLVTDFPEAEGNCTFEGGVLKAGELETTVKLTLKDVEKLNN---------LSGYVAIKLTEGSHEHLAIARTRSSYFV---------KLNLSIRLDNIDSSNKKIEGKGFNKEISFKSDIRPDKLGSLNDGNFTANNWYTSNANNYLTIILPERLDTNTSPSGSYLKSCRTPDGNWVNHGVFDRKSDGIAYISFKKPVEENAFNGRFSVDVNEVTAFR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |