Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MKKETFQDKLIKRFYGIAGPLDEFRQKEASRLGNTCFILLFWGTMALTLLALALSKRYPEVVAYGYPTALLLSTLSSSMYMTSKMRHSQVDSLDVEELTTKEQKQLKGASIKFALYFTAVMYIWTV |
1 | 5nl2A3 | 0.14 | 0.11 | 3.82 | 0.86 | SPARKS-K | | ----------------------RFPAYFTNLVSIIFMIAVTFAIVLGVIIYRISTAARVTVTATAVIINLVVIILLDEVYGCIARWLTKIEVPK-TEKSFEERLTFKAFLLKFVNSYTPIFYVAFF |
2 | 6d9zF | 0.08 | 0.07 | 2.83 | 0.95 | FFAS-3D | | -----LAEKVEVVVRGTDDFPAFSWAELMAMVTIGRELRKLGYFLPRAIALFILSLIPGLNLIAAPLWLLFGVWMMAVQYIDYPADNHKLG--------WNEMLAWLRSKRWACMGFGGITYLVLL |
3 | 6exsA1 | 0.08 | 0.07 | 2.80 | 0.23 | HHpred | | ------ISNIVG---RLY-PEND---TRIDAGFVIFYMSVNLGALISPIILQHFVDIRFHGGFLL---AAIGMALGLVWYLLFNKNLGSVGMAPTNPLSKEEKRKYGMIIGIIVAIVIVVLLVTYY |
4 | 6mjpG3 | 0.11 | 0.10 | 3.46 | 0.79 | MUSTER | | VKPEELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLVTMGARILSGVIAGFSFYISSEFFGPLSLVYGLP--------------PLFGALAPSLVFLAIALGLLG |
5 | 5t0oA | 0.06 | 0.06 | 2.46 | 0.80 | CNFpred | | YDTTKFVIESIKEVVKTF-VEALILVIIVMYMFLKATLIPMIAVPVSLLGTFAGLYFSINLLTLFALILAIGIVVDDAIIVVENIDRIL----ENEQISVKDAAIQAMQEVSSPVISIVLVLCAVF |
6 | 3vvnA2 | 0.11 | 0.09 | 3.13 | 0.44 | HHsearch-2 | | ---------------------SREILKDILRVGLPSSLSQLSMSIAMFFLNSVAITAGENGVVFTSRITMLGIVPILGMTTSVTGAAYGE-------RNVEKLETAYLYAIKIAFMIELAVVAFIM |
7 | 5cwmA1 | 0.14 | 0.12 | 4.10 | 0.75 | Neff-PPAS | | ---EDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQG------------ |
8 | 5a63D | 0.14 | 0.08 | 2.73 | 0.42 | HHsearch | | ---------------NLERVSNEEKLN----LCRKYYLGGFAFL----------------------P----FLWLVNIFWFFREAFLVP------AYTEQSQIKGYVWRSAVGFLFWVIVLTSWI- |
9 | 3g0sA1 | 0.13 | 0.12 | 4.12 | 0.89 | SP3 | | MDEKKLIDYHVAN--GTSAILSHDEHGDVVMMTLELATANVAAREMADMCKLAAEGQFAEARAINQRLMPLHNKLFNPIPVKWACKALGLVATDTTPITDHGRDIVKAALQHAGLL---------- |
10 | 5h7cA2 | 0.11 | 0.11 | 4.00 | 0.62 | PROSPECTOR2 | | TDKEEVIEIVKELAELAKQSTDSELVNEIVKQLAEVAKEALVIYIVKILAELAKQSTDSELVNEIVKQLAEVALVIYIVKILAELAKQSTDSELVNEIVKQLEEVAKEKELVEHIEKILEELKKQS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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