Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | SIRCPYCGGTAILRDASFVYGEKSYGGKVYVCSNYPKCDAYVGVHPGTRIPKGTLADQELRKKRMLAHQIFDQIWLRGILSRPDAYHWLADKFCLSDEQAHIGMFGNYMCDQVIRESKK |
1 | 2ojeD1 | 0.07 | 0.06 | 2.46 | 0.77 | SPARKS-K | | -----------SMKLRVENPKKAQKHFVQNLNNVVFTNKELEDIYNLSNKEETKEVLKLFKLKVNQFYRHAFGIVNDYNLLENMMFLKLSVVFDTQRKEAN----NVEQIKRNIAILDE |
2 | 3gn5A | 0.11 | 0.10 | 3.61 | 0.58 | FFAS-3D | | HMKCPVCHQEMVSGIKDIPYTFRGKGIHGLYC---VHCEESI-----MNKEESDAFMAQVKAFRASVNEFIVKVRKKLSLTQKE----ASEIFGGGVNA--FSRYEKPSTIKLLRVLDK |
3 | 4rulA | 0.32 | 0.15 | 4.56 | 0.40 | HHpred | | SIDCPTCGRKMGIRTAS--------TGVFLGCSGYALCKTTINLVPENEV-LNVLEGAETNALRAK----------------------------------------------------- |
4 | 5oqj3 | 0.16 | 0.15 | 5.01 | 0.90 | MUSTER | | KDMCPICKTDRYLSPDKFLVNPESLGPA--QC--YKGCDKIL---RKNKFKTQIFDDVEVEKEVDIRKRVFNVFNKTINGDLVEYNKYLEEVEDIIYKLDH--GIDVAKTEEKLRTYEE |
5 | 2qizA | 0.16 | 0.08 | 2.78 | 0.47 | CNFpred | | ---------------------------------------------------------AEHKVVIDRLFFIVDKLVRGSLNSRTDMISYFAHIA-PPFKELSSNGFMSNITLLLVRFSQP |
6 | 5d5hA3 | 0.10 | 0.05 | 1.87 | 0.55 | HHsearch-2 | | IKLFDDTHGPIYVRVG--------KNGPYLERLVAGDTGEPTPQRA--NLSDSITP---------------------DELTLQVAEELFAT---------------------------- |
7 | 4kisA3 | 0.14 | 0.12 | 4.00 | 0.69 | Neff-PPAS | | -VVCSKCGLGFVHRRKDTVSRGKKYHYRYYSCKTYK---------HTHELEKCGNKIWRADKLEELIIDRVNNYSFASRNIDKEDETVDFNSLE-----------FREKQLYLKSLINK |
8 | 1yuaA | 0.18 | 0.13 | 4.11 | 0.82 | HHsearch | | ELPCEKSDAYFVLRDG--------AAGVFLAANTFPKSRE--------TRAPLV---EELYRF-------------RDRLP--EKLRYLADAPQQDPEGVRFSRKQQKDGKATGWSAV- |
9 | 5htlA | 0.14 | 0.08 | 2.88 | 0.85 | SP3 | | ----------------------------------------------KLRKRLGIVSEAQLEQALNAQRRLGDTLISLGFLSETQLLNFLAQQLSLPVIDLSRAHVDIDAVPLLEVHARR |
10 | 3o9xA | 0.13 | 0.11 | 3.78 | 0.53 | PROSPECTOR2 | | HMKCPVCHQEMVSGIKDIPYTFRGKGIHGLYC---VHCEESI-------------MNKEESDAFMAQVKAFRASVNAETVAPEFIVKVASEIFGGGVNNAQPH----PSTIKLLRVLDR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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