Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | DGEDDETDCESETDIETEPTVPTSSVIITSIPDVSDTSSVAGPSFVSSDDGEDDETDCETESEIETVPTNPTLPTSSVIITSIPNISDTSSVAGPSFVSSDDGEEDDETDCETEIITEGPTTNTVTYGTTKTTVINSEGSLVTKTITTQLPVVTNYQTETEVVTITYTGAGQTFTTYLTQSAEICDEIVTVTITTTCPQTTVAQGGSIYTTTVTIITTHTVYPEDWEDDGYEGEGTVGTTTGTSS |
1 | 3kogA | 0.10 | 0.09 | 3.22 | 1.00 | MUSTER | | ------------------TPVNAKFIITPVVIDATTGTDVTQSAEISFSKGNGTYEGTPELASESININAKYKGTGSASVTIPALKAGQFGAKEVTIILSENFFAQEESSNSQIETTKHSGFKNNTSDYWYYITVT--TKKEGSEVIKNDYEGDDSEIKNDAYNKGVREDKVTLNDVQVLAHSRFSVFVDYKTTSVYQIIEKSPDGNPVASFTVDSYNTIVSPKNEQIPGHGHAPSHGHGH---- |
2 | 3kogA | 0.10 | 0.09 | 3.33 | 1.36 | Neff-PPAS | | -------------------PVNAKFIITPVVIDATTGTDVTQSAEISFSKGNGTYEGTPELASESININAKYKGTGSASVTIPALKAGQFGAKEVTIILSENFFAQEESSNSQIETTKHSGFKNNTSDYWYYITVTYTKKEGSEVIKNDYEGDSEIKNIIDAYNKGVREDKVTLNDVQVLAHSRFSVFVDYKTTSVYQIIEKSPDGNPVASFTVDSYNTIVSPKNEQIPGHGHAPSHGHGH---- |
3 | 4uxeA | 0.09 | 0.09 | 3.31 | 1.04 | PROSPECTOR2 | | PSNGSLTLTQQTNLSAPLVSSSTGEFGGSLAANRTFTIRNTGAPTSIVFEKGPASGANPAQSSIRVWGNQFGGGSDTTRIAFNINGTVPININASGLNVNGTATFGRSVTANGEFISKSANAFRAINGDYGFFIRNDASNTYFLLTAAGDQTGGFNGLRPLLINRSQGTKTSDLYTRAPTSDTVGFWSIDIEKTNEVTGLPYLERGEEVKSPGTLTQDWITYPTTPEARTTGALPSDNATGNLTV |
4 | 3kogA | 0.13 | 0.11 | 3.69 | 0.97 | SPARKS-K | | -----------------TPVNAKFIITPVVIDATTGTDVTQSAEISFSKGNEGTPELASESININAKYSVTIPALKAGQFGAKEVTIILSENFFAQEESSNSQI-------ETTKHSGFKNNTSDYWYYITVTYTKKEGSEVIKNYEGDDKGVREDKVTLNDVQVLAHS--------------RFSVFVDYKTTSVYQIIEKSPDGNPVASFTVDSYNTIVSPKNEQIPGHGHAPSHGHGH---- |
5 | 3kogA | 0.17 | 0.13 | 4.16 | 0.46 | FFAS-3D | | -------------------PVNAKFIITPVVIDATTGTDVT------------QSAEISFSKGNGTYEGTPELASESININAKYKGTGSASVT-------------------------IPALKAGQFGAKEVTIILSENFFAQEESSNSQIETTKHSGFKNYITVTYTKKGSEVIKNDYENKGVREDKVTLNTTSVYQIIEKSPDGNPVASFTVDSYNTIVSPKNEQIPGHGHAPSHG------- |
6 | 1ml5Z | 0.20 | 0.07 | 2.22 | 0.30 | HHpred | | --------------------------------------------------------------------------------------------------------------------------------------------FKTEIIEESEGE----VAGIKSVTIKISGDYA--YGWLRT------ETGVHRLVRK-SP--FDSGGRRHTSFSSAF----VYPEVDDDIDLRIDVYRTSGAGGQH |
7 | 5ay6A | 0.12 | 0.11 | 4.07 | 0.90 | MUSTER | | NLRSEQPVAAAVSYKVGTAGSPSKTNVVDSATNSHNYDVVYSSTGIANPVSGNNEVDIKENGVIVATGKVAYDAATNELVSSTIDYKGASPVTGSMTTTRINAAGVNASGADDAEVVAGKLYDPSTWSMSDYAKDNSKGVKPDFEVQIPLSDSKGGQRTVTLSMLKGPGPNQWYAELRAKPGDLANNGNGQISTGIIEFT---TDGKLKNTGSTSPTAITIKSSGYIAPTVTPPAVQPPTPGIDE |
8 | 2r51A | 0.09 | 0.03 | 1.23 | 0.87 | CNFpred | | -----------------------------------------------------------------------------------------------------------------------------------RATISRNDVVKEMDIVVHTLSTYPELNSSIKMEVGIE-DCLHIEFEYNKSKYHLKDVIVGKIYFLLVRI------KIKHMEIDIIKRETTGT---------------------- |
9 | 5lqwX1 | 0.26 | 0.04 | 1.26 | 0.78 | HHsearch-2 | | ---------------------------------------VSLISVSLNNEEE-----------------------------------------------EEEEEDDDDEKEEEEINSSGAKMSC------------------------------------------------------------------------------------------------------------------------- |
10 | 2yn3A | 0.10 | 0.09 | 3.37 | 1.05 | Neff-PPAS | | ----------TYSDIVNDLIIQGTAEAKSQLIITDSEGNTYTLTVPDNSAIPYDAIGNRSDDVPLDIKEVPVISLSPDSDSGTVGDNITRDKQPTFIIGNLESDVVVVQVDINGTVYNAEKNAD----GVWFFTPGTPLADGSYTISVIASDAAGNQKNSLPITVTIDSTLTVPEIALAAGEVTNHTQPKFTLQHIDATVNVTHNGVTDIYQATQGAGWTFTPPAAWNDGVTVVDRAGNSQQSAS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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