Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | GKPRSKLTQTLMNARDNASKNSEPAKSDESTGEAKSVTVPGGSKDALDNEDITLNLEDPHSESGKYWKTEFDNYRVRTNREIKKLIQYRSIAKSYARKKDTEAMRLADKLKEEEEKVAEMERQVSRLASSMVGEGSTGDK |
1 | 2otoB | 0.10 | 0.10 | 3.68 | 1.15 | MUSTER | | AANNPAIQNIRLRHENKDLKARLENAEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLEKE--- |
2 | 2otoB | 0.10 | 0.10 | 3.68 | 1.17 | Neff-PPAS | | AANNPAIQNIRLRHENKDLKARLENAEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLEKE--- |
3 | 3ieeA1 | 0.08 | 0.07 | 2.86 | 0.99 | SPARKS-K | | AAEVIKYYNTSLGVLKDVKEKDYEQKGKTPALSAIVPPAVVSKD--------SAIVLNPGNCFNEETRRNLKQNYTGLFQARTEFYANFDTYLSYLKTNAKKLLDVNYQLSTQSEYKQNIFDILSPFTEQAELVLLVD-- |
4 | 3hhmB2 | 0.15 | 0.11 | 3.59 | 0.80 | FFAS-3D | | ----TRTSQEIQMKRTA---------------------------------------IEAFNETIKIFEEQCQTQERYSKEEIQRIMHNYDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNSIKPDLIQLRKTRDQ |
5 | 6f1tX2 | 0.15 | 0.08 | 2.66 | 0.36 | HHpred | | ----------------------------------------------------------------KMLSDELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQGGGGGGGGGGG- |
6 | 3na7A1 | 0.16 | 0.14 | 4.52 | 1.08 | MUSTER | | EPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQ----------TLQD-TNAKIASIQKKMSE---KSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALEL------ |
7 | 5xg2A | 0.08 | 0.04 | 1.69 | 0.56 | CNFpred | | -----------------------------------------------------------------IKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGRIERLERKRDKLKKALEN |
8 | 6f1tX2 | 0.15 | 0.08 | 2.63 | 0.75 | HHsearch-2 | | ---------------------------------------------------------------------QHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQE |
9 | 6ewyA | 0.13 | 0.13 | 4.47 | 1.10 | Neff-PPAS | | EDDLEVSQRAVKDANAAIAAAQHRFDTFAAATYMNGPSVSYLSASSPDEIIATVTAAKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTETRRKFDEQREEVQRLAAERDAAQARLQA |
10 | 6f1tX2 | 0.16 | 0.08 | 2.62 | 0.72 | HHsearch | | ---------------------------------------------------------------------QHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQ- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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