Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | RVMLFGYKDEKLPAWFLKHQWDVKTEYHSSSFLPAETGLVDLEFKTFSMQISGAARAMLECLYLVPKKQQLLECYQIMEGLNNLRPKIVQTLLEECRSIKVKRLFLYLANKAGHQWVQYLNLDNIDLGTGKRSIVKNGVYIHKYQITVP |
1 | 1zelB | 0.13 | 0.12 | 4.20 | 1.43 | SPARKS-K | | RIPIWLPPAKRLPDGLA-----SYVSVVRIPWNAADTALRRLDLVAWALPALGPEALLVQIATRPASFGPWADLVPHLDDLVACSDERLERLLSGRP-TSAWQRASYLLDSGGEPLLAKRVMPVTRFTTAHS---GESVWAPEYQLVDE |
2 | 1zelB | 0.12 | 0.11 | 4.02 | 1.64 | HHpred | | RIPIWLPPAKRLPDGLASY-----VSVVRIPWLAPRPLLVRRVAWATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLADCSDERLERLLSGRPTSAWQRASYLL-DSGGEPKRHTEVMPVTRFTTAHSG---ESVWAPEYQLVDE |
3 | 1zelB | 0.12 | 0.11 | 4.02 | 2.48 | HHsearch-2 | | RIPIWLPPAKRLPDGLASY-----VSVVRIPWNATLLAPVDLVAWATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLADCSDERLERLLSGRPTSAWQRASYLL-DSGGEPKRHTEVMPVTRFTTAHSG---ESVWAPEYQLVDE |
4 | 1zelB | 0.11 | 0.11 | 3.87 | 1.28 | Neff-PPAS | | RIPIWLPPAKRLPDGLAS-----YVSVVRIPWNALVRRRLDLVAWATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLVACSDERLERLLSGRPTSAWQRASYLLDSGGEPARGQALLAKRHTEVMPVTRFTTESVWAPEYQLVDE |
5 | 1zelB | 0.12 | 0.11 | 4.01 | 3.44 | HHsearch | | RIPIWLPPAKRLPDGLAS-----YVSVVRIPWNATLLAPVDLVAWATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLADCSDERLERLLSGRPTSAWQRASYLL-DSGGEPKRHTEVMPVTRFTTAHSG---ESVWAPEYQLVD- |
6 | 1zelB | 0.14 | 0.13 | 4.38 | 1.68 | SP3 | | RIPIWLPPAKRLPD-----GLASYVSVVRIPWNAADTALLDLVAWATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLVACSDERLERLLSGR-PTSAWQRASYLLDSGGEAKRHTEVMPVTRFTTAHS---GESVWAPEYQLVDE |
7 | 5cwjA | 0.10 | 0.09 | 3.50 | 0.84 | SPARKS-K | | ------DSEEEQERIRRILKEARKSGTEESLRQAIEDVAQLAKKSQDSEVLEEAIRVILRIAKESGSEEALRQAIRAVAEIAKQDSEVLEEAIRVIGSRQAIRAVAEIAKEAQDPVLEEAIRVIRQIAEESGSEEARRQAERAEEEIRR |
8 | 1zelB | 0.13 | 0.13 | 4.39 | 0.74 | FFAS-3D | | RIPIWLPPAKRLPDGLAS-----YVSVVRIPWNAADTRRLDLVAWATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLADCSDERLERLLSGRPTSAWQRA-SYLLDSGGEPARGQALLAKRHTEVMPVTRFTESVWAPEYQLV-- |
9 | 1zelB | 0.14 | 0.13 | 4.38 | 0.98 | MUSTER | | RIPIWLPPAKRLPDG-----LASYVSVVRIPWNAADTALLDLVAWATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLADCSDERLERLLSGRPTS-AWQRASYLLDSGGEALLAKRHTPVTRFTTAHS---GESVWAPEYQLVDE |
10 | 1zelA | 0.12 | 0.11 | 4.03 | 0.87 | CNFpred | | RIPIWLPPAKRLPDGLA-----SYVSVVRIPWNAADTALLAPR-WATGLPALGPEALLVQIATRPASFGPWADLVPHLDDLVDCSDERLERLLSGRPTSAWQRASYLLDSGGEPARGQALLAKRHTEVMPVTRFT-ESVWAPEYQLVDE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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