Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | RRGMSGFPLGVFIGYTITIILSLFWGEGYYWAVVPALVEQCGNEINAVILQFILSGVLGSVCAASSVIWENDNWSILKQTVIHFVIISFTMLPIAYFAHWMDHTFIAIVKYFCIFIAIYIAIWAVEYSVWKHKINQINDKI |
1 | 5kbwA | 0.13 | 0.13 | 4.45 | 1.25 | SPARKS-K | | SFVGIFSALATLVMFLPALIVSFLLGPGVGMFVVLVKDILFFLMKSGDPVGIAMNAVLGMSFVGIAGLIYHRNATAIKGMIVATLFATAFALGLNALIVPLYFPFELYLKFFPFILAFNLVKFGIDSVVTFFVYKKVSSIL |
2 | 1pw4A2 | 0.07 | 0.07 | 2.90 | 1.05 | FFAS-3D | | --AYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVPTVDMICMIVIGFLIYGPVMLIGLKKAAGTAAGFTGLFGYLGGSVAASAIVGYTFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQEL |
3 | 4lz6A2 | 0.11 | 0.10 | 3.62 | 1.05 | MUSTER | | SRLRETVMLGFKVATIFSIGIFALL-----MLFPEALLRVFTAEVIQAGVSAMHILFCVTFLIGAQIVAGGQSLGKPKQALILSLSRQIIFLIPLVLILPHIFGLSGVWWAFPIADVLSFILTVVLLYRDRNVFFLK---- |
4 | 3rkoB | 0.09 | 0.08 | 2.97 | 1.03 | CNFpred | | -----TPVSALIHAATMVTAGVYLIAR------THGLFLM----TPEVLHLVGIVGAVTLLLAGFAALVQ----TDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHEQNIFKMGGLR |
5 | 4rfsS | 0.09 | 0.09 | 3.25 | 1.17 | Neff-PPAS | | ---ALGPRDGLLIGGFWGLITFVRAFTWPS---SPVAPLIFTNPLISILPRLLMGLVAGSLYLWGRHRQWSMRQAMQVAAGCAALTNTVLVLGLVFLFYQTPVLMISLFTNGIPELILDVLVAPLIAMPLRRQWERLKPQ- |
6 | 4rfsS | 0.09 | 0.09 | 3.25 | 1.17 | SPARKS-K | | TVIVAGSADGLLIGGFWGLITFVRAFTW---PSSPVAPLIFTNPLISILPRLL----MGLVAGSLYLWGRHRQWSMRQAMQVAAGCAALTNTVLVLGLVFLFYQGYVLMISLFTNGIPELILDVLVAPLIAMPLRRQWERL |
7 | 4he8G | 0.08 | 0.07 | 2.78 | 1.01 | CNFpred | | --SGLADALGTLYKVGVFAFFRFAIP---------LAPEGFAQAQGLLLFLAALSALYGAWVAFA--------AKDFKTLLAYAGLSHMGVAALGVFSGTPEGAMGGLYLLAASGVYTGGLFLLAGRLYERTGTLEIGRYR |
8 | 5kbwA | 0.07 | 0.07 | 2.89 | 1.17 | Neff-PPAS | | --SFLKYDPSEIPALIVSFLLGPGVGMFVVLVKDILFFLMKSGDPVGIAMNAVLGMSFVGIAGLIYHRNKS-RATAIKGMIVATLFATAFALGLNALIVYFEAPFELYLKFFPFILAFNLVKFGIDSVVTFFVYKKVSSIL |
9 | 3jbrE | 0.07 | 0.06 | 2.67 | 1.16 | SPARKS-K | | PTEAPKVRVTLFCILVGIVLAMTAVVSDHWAVLSEF-TTQKEYSISAAAISVFSLGFLIMGTICALMAFRKKRDYLLRPASMFYVFAGLCLFVSLEVMRQSVKRMIYYYFACACAAFVLLFLGGISLLLFSLPR------- |
10 | 3rkoC | 0.10 | 0.09 | 3.18 | 1.01 | CNFpred | | PTAGSVDLAGILLKTAAYGLLRFSLP-------------LFPNASAEFAPIAMWLGVIGIFYGAWMAFAQ----TDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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