Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | QQTYGSPEEAVQALIAAMKSHDKKQIGVVLGPYSKDIVSSGDEVADRETLEKFINLYDEKNKIEKAGDSKVVLLVGEKDWPLPIPIVQKGKRWVFDTKSGKEEILNRRIGRNELAVIKVCEAYVDAQQEFALMDTDGDGLFEYAQKFWSTPGKKDGLYWETKEGEEPSPLGPFVAKAKREGYVKSSASDQPQPYHGYFYRILKGQGKNARGGAYDYVVNGNMIGGFALVAYPAQYGNSGIMTFIVNQDGVVYQKNLGKNTANTAQAMKIFDPDKTWQKV |
1 | 5nd1B | 0.16 | 0.14 | 4.74 | 0.77 | SPARKS-K | | PKCDAGVAAAALALTAVMSEFGREELVYLLGADAQEQV-----------IRNVLAQVASAHEWM----NVHGALMPKVSRPMNEPVWNVANS-SSDLQMDRDKLNGEHFLQLAQQITVNCTGTAMAIYQAVLAGPDGDTTKDLYHHLFATTTYADGVANTRMANKMVPPVNALAAWGLGSSMDSF-----TGPHCAYYFGLATTTGRTLSVYAVDYLAMAQLEPG--LIA-TATGTGSTITTGVVDG-GLVTEGH-----------VSLYTTSAQWNGL |
2 | 3k7cA | 0.13 | 0.04 | 1.49 | 0.69 | FFAS-3D | | ----SNPEDLAKNFTKDLYSGDTKSVSYIDLSEAKS---DEEKTFVSDKITQVVAENAAKAKRKTINKDSAKIRVNDNNQSSNVFLAKKDRKWLVLLK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 5dvyA1 | 0.15 | 0.05 | 1.68 | 0.47 | HHpred | | --AVEAGEKTVEQFVQALNKGDYNKAAESKKAANKSAL---SEK---EILDKYQNIYGAALQISNKDDSTFSYKASLGELKDKGTLDRNDGQTTINWQPN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 5n8oA | 0.14 | 0.13 | 4.52 | 0.67 | MUSTER | | PPENGVIERARAGIDEAISREQLIPL-----DREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSD-RPSLAIVSGQGGAAGQRERVAELVMMAR-GRE----VQIIAADRRSQMNLKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLTLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGQGGEQRPATIISEPDRNVRYARLA--AASVKAGEESVAQVSG-----REQAILTQAIRSELKTQGVLGHPEVT |
5 | 5l9wA | 0.08 | 0.06 | 2.28 | 0.67 | CNFpred | | -------AVDLKARCTTADR-VRTRIIELCEREGADYVTGLFRKMLQVAEAGARELIEQWPDGKY--RCVTFSDAVG-VRSCYMTLEKKGDRMLVDLSETGPETPSPY----NAHPQAAIAHFSNYIYEYLFHSLPISNGTFANIDFKFGK----NTCLSPD--RAATSCSVMISTGVMSA------------VHNACAKAMFSTWKQSGASMGN------GGNALVLAGQNQ---GSSFADMLAY--------------------------------- |
6 | 3k7cA | 0.12 | 0.04 | 1.39 | 0.69 | HHsearch-2 | | ----SNPEDLAKNFTKDLYSGDTKSV-SYIDLSEAKSDE--EKTFVSDKITQVVAENAARGGIEEINKDSAKIRVNNNNQSSNVFLAKKDRKWLVLLK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 3rgaA | 0.10 | 0.09 | 3.41 | 0.91 | Neff-PPAS | | ----TVRKEVALEYCRRVNAGELEGVLQLFAPDARLVDPLGTEPVVAALAARLAPALRGAVHEEPGRPLPATVTVGAPGAPRVMGVIEVGEEMRVMW-GVTDSSWTARPAPDEERRKELAREHCLRINDGD---------VDGLLKLYSPRIRFEDPVG-SWTRTGLEALRAHATMAVGSNVRETAGLTVAGQDGRHAAVTVSATM-DYLPSGPLLARHHLMTLPAPADPHRALIGIEYVMVIGVDADGLIDEMRAG------ATDVSLLDP------- |
8 | 3k7cA | 0.12 | 0.04 | 1.39 | 0.82 | HHsearch | | ----SNPEDLAKNFTKDLYSGDTKSV-SYIDLSEAKSDE--EKTFVSDKITQVVAENAARGGIEEINKDSAKIRVNNNNQSSNVFLAKKDRKWLVLLK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 2chcA | 0.14 | 0.07 | 2.32 | 1.04 | SP3 | | LR----IQALCARYCLTINTQDGEGWAGCFTEDGA-FEFDGWVIRGRPALREYADAHARVVRGRHLTTDLLYEVDGD--------VATGRSASVV-----------------------------------TLATAAGYKIGEYQDRLI----KQDGLRNDRLVSDPSVAVNHLLAAARRLGTQMSD--------------------------------------------------------------------------------------------- |
10 | 4qanA | 0.14 | 0.13 | 4.54 | 0.84 | PROSPECTOR2 | | ITSFSEEEEAVLAIDETALQINFVKTAEELPGQLIDLPAPTSSAETKAYIEQFEELSTEIPEIAEKKEKEIYVKCGEQSYRLGFTAVQYEKNWKIREAKKTYVLPNQLTGANEKTPQRAVEQFIYAIEKRALAFATTESSQDTSPELLKKQGETLYGFLGTEDARLYGKSEEQLNKLRGKL--------NPEYVYLDLIKVIPIETEENTETVKQYAGLYSYNGKNYLTGYTLCRQEDGWQIQSLSAPALSLESGEVRLSKEESRKTS----EQSVLKA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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