Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | MNELTLIDFYLCFLAFLLFLVLIMLIIFWFSLEIQDLEEPCTK |
1 | 3dl8C | 0.09 | 0.07 | 2.70 | 1.68 | SPARKS-K | | --KATISVIIFSLAIGVYLWILDLTFTKIISFILSLR------ |
2 | 6b8hA | 0.26 | 0.26 | 7.91 | 1.48 | MUSTER | | MPQLPFYFMNQLTYGFLLMITLLILFSQFFLPMILRLRLFISK |
3 | 1mztA | 0.15 | 0.12 | 3.91 | 1.25 | SPARKS-K | | FDSLQASAYIGYAWAMVVVIVGATIGIKLFKKF---------- |
4 | 5wj5A2 | 0.14 | 0.12 | 3.95 | 0.43 | FFAS-3D | | ----LFSQLYLYSFISLFIYMVLSLFIALITGAYDTIKH---- |
5 | 2kncB | 0.22 | 0.19 | 5.88 | 0.29 | HHpred | | ----DILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEFA-- |
6 | 2latA | 0.19 | 0.16 | 5.26 | 1.38 | MUSTER | | MIT----DVQLAIFANMLGVSLFLLVVLYHYVAVNNPKK--QE |
7 | 6c70A | 0.10 | 0.09 | 3.47 | 0.63 | CNFpred | | --IYQFYYLVISMAVSNSLDVLFCSWLLFACEQLQHLKAIMKP |
8 | 1vt4I3 | 0.21 | 0.21 | 6.63 | 0.66 | HHsearch-2 | | LNTLQQLKFYKPYICDNPKYERLVNAILDF-LPKIEENLICSK |
9 | 4rnbA1 | 0.17 | 0.14 | 4.60 | 0.98 | Neff-PPAS | | HHMRTVTNYFIVNLSLADVLVTITCLPATLVVDITE------- |
10 | 2kncB | 0.19 | 0.19 | 6.00 | 0.47 | HHsearch | | SKGPDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAK- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|