>PF11369 (626 residues) SEAQKLLVDNGFVVIPAQNPEFFIVYETNRYDGIPNFITTDAMLHNYHLFFNQLLKTVET QYLIPELKKLNTGMLAESQKQYESLKGTAWENAARRNVAFFAVGNRLLDPQAKIPEQVKE EVERELALIEAHQETAVSPVMTMGKSPDVLESLKEDYTQYIPRGHYVKSEELKNYFKTMT WYGRLTFRLKDQDEIRSAVLMTLALNRGENLKNWENIYRTTAFFVGKSDDLGYLDFQPIL AEVYGNAVSLKQLATDSSQWELFMKKAAKLRPPAINSIPIFDETIQPDREREIKGFRFMG QRFTLDASVFQRLVYREVKENPDGQRRVLPKGLDIPAAMGSGESYAILKEMGETRYRNYP ENMAKMRQYIKGLDKSTWTQNLYWSWLYTLKPLIQEKPEGYPSFMRNQAWARKELNTYLG SWTELKHDTVLYAKQVYAEMGGGWEQGDDRGYVEPNPEVYARLAALTAMTREGLQSRGLL AERDKESLNRLEKLALDLKDISVKELNNEPLSEADYELIRTFGGQLEHFWLEALRDEVES RSQIWENPAPVVADVATAPPDLVLEEGTGYISDIYVVVPVEGKLRIARGGVYSYYEFPWS AADRLTDQKWQEMLRSGKAPEPPKWT |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SEAQKLLVDNGFVVIPAQNPEFFIVYETNRYDGIPNFITTDAMLHNYHLFFNQLLKTVETQYLIPELKKLNTGMLAESQKQYESLKGTAWENAARRNVAFFAVGNRLLDPQAKIPEQVKEEVERELALIEAHQETAVSPVMTMGKSPDVLESLKEDYTQYIPRGHYVKSEELKNYFKTMTWYGRLTFRLKDQDEIRSAVLMTLALNRGENLKNWENIYRTTAFFVGKSDDLGYLDFQPILAEVYGNAVSLKQLATDSSQWELFMKKAAKLRPPAINSIPIFDETIQPDREREIKGFRFMGQRFTLDASVFQRLVYREVKENPDGQRRVLPKGLDIPAAMGSGESYAILKEMGETRYRNYPENMAKMRQYIKGLDKSTWTQNLYWSWLYTLKPLIQEKPEGYPSFMRNQAWARKELNTYLGSWTELKHDTVLYAKQVYAEMGGGWEQGDDRGYVEPNPEVYARLAALTAMTREGLQSRGLLAERDKESLNRLEKLALDLKDISVKELNNEPLSEADYELIRTFGGQLEHFWLEALRDEVESRSQIWENPAPVVADVATAPPDLVLEEGTGYISDIYVVVPVEGKLRIARGGVYSYYEFPWSAADRLTDQKWQEMLRSGKAPEPPKWT | |||||||||||||||||||
1 | 2x1gF | 0.09 | 0.07 | 2.64 | 1.18 | FFAS-3D | PELSILVHR-----------IVQEILHCTDKPGIYPVECSTMALAFWYMLQDEVFAHKCWEYIKPLYAHLTRILVRKSEQPDEKSLAKWSSDDLECFRCYRQDISDTFMYCYDVNDYILEILAAMLDEAIADLQRHPTHWFQSVAEHRQIPRLMRVLAEIPYE---KLNVKLLG--TALETMGSYCNWLMYIPPAINLLVLKELCRDLQLKPYADPLLNACHASL-NTGRMKNSDSVRLMFSIGKRPEEIPKYL--DIIVSPCFEELQAICQATPAARIRLNTPVLLVMQRTMPIFKRIAEMWVEEIDVLEAACS---------------AMKHAITNLRSQPMLQDLCLFIVASFQCCAPTLEISKTAIVMFFKPLMQQ-LLREFIQHSFKLFESTPEQ--NFSNISD-TMETFFGCLTQIIKKIPQVLEDKTLAYDRL--VFYAQRGMTLPESGAQFLTHFVMQSAHVTEVVLATGVGYLTPRSQVDKFADILLAMNRKYAAEMATQLITDADKTRYRLLQQHLSEMAMKT--------------------------------------------------------------------------------------------- | |||||||||||||
2 | 5uwtC | 0.09 | 0.07 | 2.46 | 1.25 | CNFpred | QNTLQQIATSVMPV----TADLKATYANANG-NDQSFL--QDLAMFLTTYLARNRALLESDSLRELLLNAHQYLIQLSKI--------EERELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQLRLVIIENMVRPEE---------------SDTIQLYK---------SEREVLVYLTHLN--------VIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLGLCEQKRGKDNKAVVASDIMYVV---------------------GQYPRFLKAHWNFLRTVILALFEFMHETHEGVQD----MACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQP-QQVHTFYKACGIIISEER-------------SVAERNRLLSDLMQLPNMAWDTIVEQST----------------TLLLDSETVKIIANIIKTNVAVCTSMGAFYPQLGHIYYNMLQLYRAVSSMISAQVAGLIATKPKVRGLRTIKKEILKLVETYIS------------------------------------------------------------------------------------------- | |||||||||||||
3 | 5mqfM | 0.11 | 0.10 | 3.62 | 1.49 | Neff-PPAS | HKMPRLWLDYCQFLMDQGRVTHTRRTFDRALRALPIT-QHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDR------LDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFTDQLGKLWCSLADYY--IRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRPREIINTYTEAVQTVDPFKAT---------GKPHTLWVAFAKFYEDNGQLDDTKVNFKQVDDLASVWCQCGELELRENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLG---------TFQSTKAVYDRILDLRIAQIVINYAMFLEEHK---------YFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGRKLERARDLFEQALDGCPPKYAKTRHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEM | |||||||||||||
4 | 3u44B | 0.09 | 0.08 | 3.24 | 1.29 | PROSPECTOR2 | GSIQDELRRAPIFLVMGGMIRLAWRVLQHTGGMSRPFLTSTGVQMLLRKLIEEHKQEFKKSGFTAQVERMLTEFIRRMAESGTASEYRGERVLSEKLHDLSILLAEHIPLAEDIKYRLHQKAKPELAHLEAQYEARPAIPYAEKQEAALVREKGYRYKDVTELLFPLNEEQVDQLENYCIAYGIKGDRWTKTDQEIEMENMLNDTR-DWIVPPLFQLQKKAEALYRYLEETDVPLKLDQERQRAEDDGRIIEAQQHQQAWDAVIQLLEEFVEMMGDDEIGAESLTFSLIPPALDQVFVGDENGVLSDDDREWLKTIGVELSSGGIADAEGKTLLPSMIV--KRLEELFPHHKERLLTNEPEQVSDEEQLMYVVNKS-----VAQSFTASQLRLWTREYDISDVWWSTYNVLRLQSKKLFSSLFFRNEVKQLERSVSRQLYGERIQLKERQFFKLEAPDIGQLFHSSLKLISDRLRDEKLDWRDLTK--EQCELFSYDAVERLAPKLQKEILSNRHYYVKEKLQKIVTRVS-------GILSEHAKASGFVPIGGFGGKGPLPPLTFQLKNGCTMELKAESSKGLLLRIS------------DKGLDLAESITHSADWLGMRAMIQS | |||||||||||||
5 | 3c2hB | 0.09 | 0.07 | 2.64 | 0.91 | SPARKS-K | KTIRTWIRQDKF----AQVDQILNIIYDGLKPQLPYYNLLDILRRFIHQVVQQDFRELICNLISLNWQKCANQVFQIFNCIIMGVKNEKLRTEFAQHLKLVGTLSEYFNPQVHP-GMINPAIFIIFRFIISKDTRLKDYFIWNNNPHD-QPPPPTGL-----------------IIKLNAVMIGSYRLIAGQNIIRTFDLLGLLLHDSDAIDGFVRGVGAITTVVQYPNNDLIRAGCKLLLQVS----DAKALAKTPNILPFLLRLIEIHPDD---------------------------EVIYSGTGFLSNVVA------------------------HKQHVKDIAIRSN---------AIFLLHTIISKYDAPKRNREIICNCLRTLNNFLMNGTKTAGKFIEIDILKKLMSCLSLELRSTILRSFILLLRTPFVPKVIDENRKEN-------------LIGHICAAYSWVFRQP-NNTRTQSTKQQLVERTISLLLVLMEQLNGNQVKPTFIHNVLVVCDKILEHCPTRADITIDRPMLEGLTNHRNSDIAKAANSLLSRFPEN---------------------------------------------------------- | |||||||||||||
6 | 2x19B | 0.09 | 0.08 | 3.09 | 1.18 | FFAS-3D | -QDCEAL--------------IQAAFAALQDSEL-FDSSVEAIVNAIVNTLLKLIPLVTSHGICRIAVALGENHSRALLDQVEHHYPVNETTSSLTLTFWYTLQDDILSFEAEKQAVYQQVYRPVYFQLVDV-----LLHKAQFPSDEEYGFWSSD-----------EKEQFRIYRVDIS---DTLYVYELGAELLSNLYLGRLLTSSEEPYSWQHTEALLYGFQSIAETIDVPGLIGLIPRISISNVQLADTVF---TIGALSEWLADHPVNSVLPLVLHALGNPELSVSSVSTLKKIKYDLPPYAANIVAVSQDVLKQIHKTSQCWLQALGFLLSALQVEEILKNLHSL-------ISPYIQQLEKLAEEIPNPSNKLAIVHI-LGLLSNLFTTLDISHHKWLNDAQVVEAVCAIFEKSVKTLLDDFAPVPQLCELGR---YSTIPQASALAHFPPIEALFLLVTSVTLTLFQQGPRDHPDIVDSFQLLAQALKRVKAVFQCAVL--ALKFPEAPTVKASCGFFTELLPRCGEVESVGKVVQEDGRLAVLEAIGGQASRS-----LDCFADILFAL--NKHCFSLLSWIKEALQPPGFPSARLSPEQKDTFSQQ---------- | |||||||||||||
7 | 1vt4I | 0.11 | 0.08 | 3.00 | 0.44 | HHpred | -----------------QYKDILSVFEDADVQDMPKSLSKEEIDHIIMSKDA-------VSGTLRLFWTLLSKQEE----MV----QKFVEEVLRINYKFLMSPIKTEQR---QPSMMTRMYIEQRDRLYNDNQ---------------------------VFAKY-NVSRLQPYLKLLLELRPAKNVLIDGVKTWVALDVCLSYK-------VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYPNTSRSDHSSNKLRIHSIQAELKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDTLKYLDCRPQDLPREVLTTNPRRLSIIAESGLATWDKLTTIIESSLKMFDRLSPSAHIPTLSLIWFDVIHKYSVEKQPKESTISIPSIYLELKV--------KLENEYALHRSIVDHYNIPFDSDDLIPPYL--DQYFYSHIGHHLKNIEHPERMTVFLDFRFLSILNTL----QQLKFYKPYICDNDP---KYERLVNAILDFLPKIEENLICS-KYTRIALMAEDEAIFEEAHKQV------------------------------------------------------------------- | |||||||||||||
8 | 5ifeC | 0.12 | 0.11 | 3.92 | 0.92 | MUSTER | ATMISTMRPD--VASALGIPSLLPFLKAVCKSKKS-----WQARHTGIKIVQQIAILM--CAILPHLRSLVEIIEHGLV-----DEQQKVRTISALAIAALAEAAT-----PYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMD----------------AEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVANKVGAAEIISRKMVMETIEKIMGNLGAADIDHKLEILYAFQEQTTEDSVMLNGFGKRVKPYLPQICGTVLWRL-NNKSAKVRQ--QAADLISRTAVGHLGVVLYEYGEEYPEVLGSILGALKAIVNVIGMHKMTPP-IKDLLPRLTPILKNRHERGAEYVSAREWMR-ELLELLKA-KAIR-RATVNTFGYIAKAIGPHDVLATLQNRVCTTVAIAIVAETPFTVLPALMNE-YRVNVQNGVLKSLSFLFEYIGEMGKDYIYADALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNH----LNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCR--------MLQY--CLQGLFHP--ARKVRDVYWK-GSQDAPRIY | |||||||||||||
9 | 5dh9C | 0.10 | 0.07 | 2.54 | 1.24 | CNFpred | QNTLQQIATSVMPVT----ADLKATYANANG-NDQSFL--QDLAMFLTTYLARNRALLESDSLRELLLNAHQYLIQLSKI--------EERELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQLRLVIIENM-------------------------------VRPTIQLYKSEREVLVYLTHLN-------VIDTEEIMISKLARQIDEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLGLCEQKRGKDNKAVVASDIMYV----------------------GQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQD----MACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQP-QQVHTFYKACGIIISEER-------------SVAERNRLLSDLMQLPNMAWDTIVEQST----------------TLLLDSETVKIIANIIKTNVAVCTSMGAFYPQLGHIYYNMLQLYRAVSSMISAQVALIATKTPKVRGLRTIKKEILKLVETYIS------------------------------------------------------------------------------------------- | |||||||||||||
10 | 1vt4I | 0.10 | 0.08 | 2.87 | 0.34 | HHsearch-2 | ------------MDFETQYKDILSVFEDAFVQDMPKSISKEEIDHIIMSKDA-------VSGTLRLFWTLLSKQEE----MV----QKFVEEVLRINYKFLMSPIKTEQR---QPSMMTRMYIEQRDRLYNDN---------------------------QVFAKYN-VSRLQPYLKLRLELRPAKNVLIDGGKTWVALDVCLSY-------KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYPNTSRSDHSSNKLRIHSIQAELKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKTDFLSAATTTHISLDHHTLKYLDCRPQDLPREVLTTNPRRLSIIAESGLATWDNLTTIIESSRKMFDRLSPSAHIPTISLIWFDVIHKYSVEKQPKESTISIPSIYLELK--------VKLENEYALHRSIVDHYNIPFDSDDLIPPYL--DQYFYSHIGHHLKNIEHPERMTLFRMVFL-----DF----RFLEQKIR-HDSTAWSILNTLQQLKFY---KPYICDNDP-KYERLILFLPKIEENLICSKYTDLL----RIALM-------------------------------AEDEAIFEEAHKQVQRGG--GGGGGG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |