Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MFYLIMAVLIISYYLYMAPKSVRNTLGMIGLVGLVALLIVLAGLSFIKIMQTPPEFFIGMGMVALGYFALKDVRKMTKKPR |
1 | 6a2jA3 | 0.09 | 0.09 | 3.32 | 1.04 | SPARKS-K | | VLLLFVWIIVAAVHAITSYKDQKQIFWGWISCLIFITLQALSGIMIVYLGFALAHSFFIACLFGVLCYFLLLIARFRYES- |
2 | 6cfwB | 0.16 | 0.15 | 4.94 | 1.15 | MUSTER | | TLLIGIAGIITFIRLALGPTVPDRVVAVDTLNTLIVAIMLLLGAAY-----RAIYIDIAIVYALLSYVGTLVIAKYLQGGL |
3 | 6a2jA3 | 0.09 | 0.09 | 3.32 | 1.01 | Neff-PPAS | | VLLLFVWIIVAAVHAITSYKDQKQIFWGWISCLIFITLQALSGIMIVYSELALAHSFFIACLFGVLCYFLLLIARFRYES- |
4 | 5ogeA2 | 0.07 | 0.07 | 3.00 | 1.01 | SPARKS-K | | IYTIFKNLTIILIAYGEVTSMELSSFLLMVLSSVVATWTTYSMVGALNLSGLNFLSILSIFIGFLSGIIYAVAKQKKQQAQ |
5 | 3rkoK | 0.15 | 0.15 | 4.98 | 0.79 | FFAS-3D | | -HGLILAAILFVLGLTGL-VIRRNLLFMLIGLEIMINASALAFVVAGSYWGQTDGQVMYILAISLAAIGLALLLQLHRRRQ |
6 | 5h35C | 0.17 | 0.17 | 5.65 | 0.28 | HHpred | | LNYLLLSVGISIFVFYFYKWLQTNPIKMIIAISDAVGLSTFATLGASLAYSYGLNPISVGLIAGTGGGVIRDVLVNEIPM- |
7 | 5x5yG4 | 0.12 | 0.11 | 3.94 | 1.13 | MUSTER | | PLVTAALVLMAISFIFGPLRSVTLGQRIFTGVLVGFVFRIAQDLLGPSSLVFPPLLAVVIPASICALAGVWLLRRA----- |
8 | 3rkoB | 0.07 | 0.07 | 3.00 | 0.77 | CNFpred | | HLVGIVGAVTLLLAGFAAQTDIKRVLAYSTMSQIGYMFLALGVQWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFK |
9 | 5tj5A | 0.18 | 0.17 | 5.64 | 0.47 | HHsearch-2 | | LSVCIVYLLNMLINMFLSPGTIDDELYKVQVFLLLMALVCIPWLLLVKPLHFKFDIMIHQVIHTIELWALSSVESMSK--P |
10 | 5ezmA3 | 0.16 | 0.16 | 5.33 | 0.92 | Neff-PPAS | | IGMAIVAACGLLASPVVANSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGHETVGRPAS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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