Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | LGGFSGLIYSTLPVLVFVPVNTFAGLTAAIWSALGVAAAILVWRLVRRSPIQPAISGFLGVGICALIAYRMGEAKGFFLFGIYTSLVYAGVFLVSMLVRWPLVGVIWGVLNGHGTEWRSDRRVVRLYDLATTTWVIVFGARYLVQSQLYDTDRTGWLAFARIAMGWPLTAVALAVTVWAVRRAGH |
1 | 1xioA | 0.10 | 0.10 | 3.62 | 1.19 | SPARKS-K | | LLHWIYVAGMTIGALHFWSLSRNPRQYEYLVAMFIPIWSGLAYMAMAIDIAHMVTTPLLLLSLSWTAMQFIKKDWTLIGFLMSTQIVVITSGLIADLCGVCAFLIILWGIWNPLRAKTRSSELANLYDKLVTYFTVLWIGYPIVWIIGPSGFQTIDTFLFCLLPFFSKVGFSFLDLHGLRNLND- |
2 | 6idpA2 | 0.10 | 0.10 | 3.58 | 1.26 | FFAS-3D | | ---LTALGHIMGPAMLSQLLPPLSSMFATKLLAAAVAAWALGSRFEF---FALVAVLAMTMSLPPMIGRMLGAIRQLVRIACQFVLGFQLLIALVTYV---FATPLAELMTSETEVSQILNLHLVIVPISLGALGICMLMVSVANCLWLGAHFYGIEGLIGALVGNIIAGWAAWLAYQKALRSEN |
3 | 3rkoB | 0.07 | 0.06 | 2.72 | 1.13 | CNFpred | | --VSALIHAATMVTAGVYLIARTHGVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASG---SVILACEQNIFKMGGLRKSIPLVYLCFLVGGAALSAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQI |
4 | 3o7pA2 | 0.07 | 0.07 | 2.88 | 1.06 | Neff-PPAS | | QGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSPTIFSLGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFARFRSQT--- |
5 | 6eyuA | 0.09 | 0.09 | 3.48 | 1.16 | SPARKS-K | | FILAYIITAMISGLLFLYLPRKLDVPQKFGIIHFFIVVWSGLMYTNFLNQSFLMVSTPLILLALGLTAFHGTKRYDLLGALLGAEFTLVITGLLAQAQGSILLLGVVYLLAKPFREIAESDGLARAYKILAGYIGIFFLSYPTVWYISGPTQTSIALVVLPFFCKQVYGFLDMYLIHKAELEHH- |
6 | 5y50A2 | 0.12 | 0.12 | 4.16 | 1.24 | FFAS-3D | | ---MGEFFRFGIPSASMICLEWWSFEFLVLLSGLEASVLSVCLSTQS---SLYQIPESLGAAASTRVANELGAARMAVYTAMVITGVESIMVGAIVFG---ARNVFGYLFSSETEVVDYVKSMAPLLSLSVIFDALHAALSGVARILLAFGFKMRGRGLIGITVGSCVQAVLLGLIVIQARKARE |
7 | 3hfxA | 0.13 | 0.12 | 4.12 | 0.25 | HHpred | | ------IMNYFTDSVGMLLMYLWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGVILWTVLGSNTLDKNIVAAITWASMWGFFILCFIATVTLVNACS--YTLAMSTCREVRDGEEPPL------LVRIGWSILVGIIGIVLLA---LGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQ |
8 | 3wajA1 | 0.10 | 0.10 | 3.76 | 0.85 | MUSTER | | FSATPAIGGVLAILPVYLLTREVFDKRAAVIAAFLIAIGQFLQRSILGFNDHHIWEAFWQVSALGTFLLAYNRWKGQMAYPVIAGITIGLYVLSGFII--PIILAFMFFAFVLAGFVNADRKNLSLVAVVTFAVSALIYLPFAFNYPGFSTIFYSPFQLLVLLGSAVIAAAFYQIEKWNDVGFFE |
9 | 4he8F | 0.09 | 0.09 | 3.31 | 1.07 | CNFpred | | ---GPTPVSALIHAATMVTAGVYLIARSSFLYSVLPDVSYAIAVVGLLTAAYGALSAFGQTDIKKIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFKALLFLASGSVIHGEQDVRK-PQTRWHALIGALALGGGFWSKDAILAATLTYPGVGFYVGALLVAVLTAMYAMRWFVLVFLGEERG |
10 | 6i1rA2 | 0.13 | 0.11 | 3.77 | 0.61 | HHsearch-2 | | --VVPSVIYLIHNNVQFATLT-YVDPSYQIMGNLKIVTTGILFRLVLKRKLSNQWMAIVLLAVGTTTSQVKGCGDSAPLEGYLLGILSACLSALAGVYT--------EYLMKK-----NDNIVKVYSTSMAML-------LTMVLSIYLFSVKATI----QLFLGIIICIISLQMYFMPVHMLIE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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