Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | TNIKIIGPDRIKLSWEISSNSNQLLPWQEKLQEGFRGISPQANISSNKNGKQLFEVPSLSSNDADILLQNIISIAANAAGFEAPSSSIHLTERNLLIGIDQQLDLNIDLRDFPDIPNLNLAIFLDPASSKNNPKGNPVKPILLDNNLKWELQNGEINKLFLHRWQWSRLGLGTLLIILIMGFSMILQTLKLKM |
1 | 2nc8A | 0.14 | 0.10 | 3.56 | 1.22 | SPARKS-K | | ASITISPDDLVSGEIIAAAKPKDGDV-------PFSQKVAVSNYDSDGYVGSQAVFSDLTFAE----LPQLANMNSDAAGV-----NLSLRRNG----NIVILEGRADLTSVS-DPDADVELTVAFPAAVTSTNGD----RIEPEVVQWKLKPGVVSTMSAQARYTDPNTRS--------------------- |
2 | 2nc8A | 0.14 | 0.11 | 3.74 | 1.00 | MUSTER | | ASITISPDDLVSGEIIAAAKPKNSKDTGPALDVPFSQKVAVSNYDSDGYVGSQAVFSDLTF----AELPQLANMNSDAAGV-----NLSLRRNG----NIVILEGRADLTSVS-DPDADVELTVAFPAAVTSTNGD----RIEPEVVQWKLKPGVVSTMSAQARYTDPNTRS--------------------- |
3 | 2nc8A | 0.13 | 0.10 | 3.44 | 2.14 | HHsearch-2 | | ASITISPDDLVSGEIIAAAKPKDTGP-ALDGDVPFS-QKVAVSNYDSDYVGSQAVFSDLTFAELPQLAN-MNSDA----A----GVNLSLRRN----GNIVILEGRADLTSVS-DPDADVELTVAFPAAVTST--NG---DRIEEVVQWKLKPGVVSTMSAQARYTDPNTRS--------------------- |
4 | 2nc8A | 0.12 | 0.09 | 3.32 | 1.06 | Neff-PPAS | | ASITISPDDSGEIIAAAKPKNSKDTGPALDGDVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAA---------GVNLSLRRNG----NIVILEGRADLTSVS-DPDADVELTVAFPAAVTSTNG----DRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRS--------------------- |
5 | 2nc8A | 0.13 | 0.10 | 3.58 | 2.34 | HHsearch | | ASITISPDDLVSGEIIAAAKPKKTGP-ALDGDVPFS-QKVAVSNYDSDYVGSQAVFSDLTFAELPQLA-NMNSDA----A----GVNLSLRRN----GNIVILEGRADLTSVS-DPDADVELTVAFPAAVTST--NG---DRIEEVVQWKLKPGVVSTMSAQARYTDPNTRS--------------------- |
6 | 5j6yA | 0.07 | 0.06 | 2.58 | 0.75 | SPARKS-K | | DSTPDSLFAGLVGEYYGTNSQLNN---ISDFRALVDSKEADATFEAA---NISYGRGSSDVAK-GTHLQEFLGSDASTLSTDPGDNTDGGIYLQGYVYLTYNFKVTADD-------GYEITIVATVDNNQSVYTVTHASFTISESDMIWWDQGG-DYVFQPTLSADGGSTYFVLDSAILSSTGETPYT----- |
7 | 2nc8A | 0.12 | 0.09 | 3.27 | 0.92 | FFAS-3D | | -SITISPDDLVSGEIIAAKDTGPALDGDVPFSQKVAVS----NYDSDGYVGSQAVFSDLTFAELPQLANMNSDAA---------GVNLSLRRNG----NIVILEGRADLTSVS-DPDADVELTVAFPAAVTSTNGD----RIEPEVVQWKLKPGVVSTMSAQARYTDP------------------------- |
8 | 2nc8A | 0.13 | 0.10 | 3.58 | 0.94 | HHpred | | ASITISPDDLVSGEIIAAAKPKDTGP-ALDGDVPFS-QKVAVSNYDSDYVGSQAVFSDLTFAELPQLA-NMNSDA----A----GVNLSLRRN----GNIVILEGRADLTSVS-DPDADVELTVAFPAAVTST--NG---DRIEEVVQWKLKPGVVSTMSAQARYTDPNTRS--------------------- |
9 | 2jheA | 0.14 | 0.12 | 4.08 | 0.64 | MUSTER | | --------MRLEVFCE------DRLGLTRELLDLLVLRGIDLGIEIDPIGRIYLNFAELEFESFSSLMAEIRRIAGVTDVRTVPWMPSEREHLEPVLSVDMKSKVDM-LFGQKLLRNHTAAQLINGFNFLRWLESEPQDSHNE--HVVIN---GQNFLMEITPVYLQDENDQHVLTAVVMLRSTI-------M |
10 | 2nc8A | 0.11 | 0.08 | 2.97 | 0.85 | CNFpred | | ASITISPDDLVSGEIIAAAKPGPALDGDVPFSQKVAV-----SNYDSGYVGSQAVFSDLTFAELPQLANMNSDAA---------GVNLSLRRN----GNIVILEGRADLTSVS-DPDADVELTVAFPAAVTST----NGDRIEPEVVQWKLKPGVVSTMSAQAR----------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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