>PF11312 (320 residues) FRNSFAERLSSDFAPLLQEVKGHLYNRDFATAFGKKEYLEVYAARWSPSRALGYLDLLWE LRDHLEFVDEDSDADGEEESGCKSYKVVCLGGGAGAEVVALGGLQKLLSTLAPQEQEDQE KKKPRRMEISAVDIADWSVVVENLAQHLTTTPVLSKYASAAAKAANVPFADPEDISITFH QHDVLQASTPAINSQLAEASLVTLLFTLNELYTTSLPLTQKFLLHVTSVLRPGALLLVVD SPGSYSSVTLNGAEKKYPMQWLLDHTLLNQASSNKNERGKEEIASWEKITEDDSRWFRLD DRLQYPIELENMRMQMHLYR |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FRNSFAERLSSDFAPLLQEVKGHLYNRDFATAFGKKEYLEVYAARWSPSRALGYLDLLWELRDHLEFVDEDSDADGEEESGCKSYKVVCLGGGAGAEVVALGGLQKLLSTLAPQEQEDQEKKKPRRMEISAVDIADWSVVVENLAQHLTTTPVLSKYASAAAKAANVPFADPEDISITFHQHDVLQASTPAINSQLAEASLVTLLFTLNELYTTSLPLTQKFLLHVTSVLRPGALLLVVDSPGSYSSVTLNGAEKKYPMQWLLDHTLLNQASSNKNERGKEEIASWEKITEDDSRWFRLDDRLQYPIELENMRMQMHLYR | |||||||||||||||||||
1 | 4azsA | 0.17 | 0.11 | 3.61 | 1.21 | HHpred | ------------------DLNTLVLPEIYQTIFGHPEW-DGDAARDCNQRLDLITEQYDNLSRA----------------LGRPLNVLDLGCAQGFFSLSLAS---------------------KGATIVGIDFQ---------QENINV-------CRALAEEN-------PDFAAEFRVGRIEEVIA-AL--EEGEFDLAIGLSVIVHLH--GIDEVKRLLSRLADLIGEFDTHLS-PVPR--PMYLVSN---HR---VL-----INDFNQ--------PFQHWQNQFGEDCKFFYYDMPHGITAESQRNKYE----- | |||||||||||||
2 | 5mptA | 0.13 | 0.10 | 3.36 | 1.01 | CNFpred | -------AEHKLTSLTGSKFADCITGEDGLQLIEGREIVTDVYAK-SPINAVWIQQAEFFLEQLVKRLP----------NTGEPLRILEMGAGTGGTTVKMLPLLERLG---------------VPVEYTMTDLS--SSLIAAARKRFKK-----------------------YPFMKFKVVNIESPPDPQLV---HSQHIILATNCVHATR-----NLEISTRNIHRILRPDGFLLLLEMTE------------QVPWVDFIFGLLEGWWLEDGRRHALQPATHWKKILT-YGHVDWTEGTR---PEANIQRLIIALAS | |||||||||||||
3 | 5xlxA | 0.13 | 0.08 | 2.71 | 1.36 | SP3 | ------------------------------------------------------TLWFRD-TYPFEVLKQRVLPELIKANGGQRLRIWSAACSSGQEPYSLSMAIDEFEKTNLGQL-------KAGVQIVATDLSG--SMLTAAKAGEYDTLAMGRGLSPERLQRYFDAKGPGRSRVEFRALNLLDSYAS-----LGKFDMVFCRNVLIYF---SAEVKRDILLRIHGTLKPGGYLFL-----------------------------------GASEALNNLPDHYQMVQCSPGIIYRAK-------------------- | |||||||||||||
4 | 5mptA2 | 0.14 | 0.11 | 3.73 | 1.18 | PROSPECTOR2 | GSILPKSAILDAFRIAKEATDDFILNGQLQLIFGSPEGREIVTDVYSPINAVWIQQAEFFLEQLV----------KRLPNTGEPLRILEMGAGTGGTTVKMLPLLERL---------------GVPVEYTMTDLS--SSLIAAARKRFKKYPF-----------------------MKFKVVNIESPPDPQL---VHSQHIILATNCV--HATRNLEI---STRNIHRILRPDGFLLLLEMTEQVP-----------WVDFIFGLLEGWWLFEDGRRHALQPATHWKKILTSVGHVDWTEGTRP---EANIQRLIIALAS | |||||||||||||
5 | 5ftwA | 0.15 | 0.10 | 3.48 | 1.31 | SP3 | --------------DTYSVFTTKWKQLDLTLY--KEAQMKRRLTSLYEKKFKDFAAALEKDQALLNETLDRMTINVSEIKTSRPLKIWSAACSTGEEPYTLAMLLDQQ-------------KGLPGYQILATDID--EKALEKAKKGVYQEVPLSVKDRYFTQNANRSYEVKTEINITFKKHNLLADR------YEQDFDLIVCRNVFIYF---TESAKEELYLKMAHSLKKNGVLFV------------------------------GSTEQIFNPEKFG-------LVPADTFFYQKR-------------------- | |||||||||||||
6 | 2ckdA | 0.11 | 0.09 | 3.15 | 1.16 | PROSPECTOR2 | YAKLLVTNTGAG--ALWEAMLDPSMVAKVEAIDAEAAAMVEHMRSYQAVRTNFFDTYFNNAVI------------------DGIRQFVILASGLDSRAYRL--------------------DWPTGTTVYEIDQ---PKVLAYKSTTLAEHG------------------VTPTADRREVPIDLRQDWPPALRSAPSARTAWLAEGLLMYL---PATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQLR---FRRVSDALGFEQAVDVQELIYHDENRAWRATAQSAPDEMRGDGVPMADDKDAFAEFVTAHRL | |||||||||||||
7 | 1af7A | 0.11 | 0.08 | 2.80 | 0.90 | SPARKS-K | ICQLIYQRAGIVLAMVYNRLVRRLRALGL----DD---FGRYLSMLEAEWQAFINALTHHFPILAEHARRRH----------GEYRVWSAAASTGEEPYSIAITLADALG-----------MAPGRWKVFASDID--TEVLEKARSGIYRLSELKTLSPQQLQRYRGTGPHEGLVRVEFSSVNLLEKQY----NVPGPFDAIFCRNVMIYF---DKTTQEDILRRFVPLLKPDGLLFAGENFSNLVRSLRGQTVYALS-------------------------------------------------------------- | |||||||||||||
8 | 5xlxA | 0.16 | 0.10 | 3.20 | 0.96 | FFAS-3D | --------------------------------FRDTYPFEVLK-----------QRVLPELIKAN---------------GGQRLRIWSAACSSGQEPYSLSMAIDEFE-------KTNLGQLKAGVQIVATDLSG--SMLTAAKAGEYDTLAMGRGLSPERLQRYFDAKGPGRWAVEFRALNLLDSYAS-----LGKFDMVFC---RNVLIYFSAEVKRDILLRIHGTLKPGGYLFL-----------------------------------GASEALNNLPDHYQMVQCSPGIIYR---------------------- | |||||||||||||
9 | 3dp7A | 0.15 | 0.10 | 3.39 | 0.93 | HHpred | ----NHDVNQGHLEEALLNG-----RPEGLKVFGEWPTIYEGLSQL-PEQVQSWFGFDHFYGKALEIV-----------FSHHPKRLLDIGGNTGKWATQCVQY-------------------NKEVEVTIVD---LPQQLEMMRKQTAGLS-GS-------------------ERIHGHGANLLDRDVP----FPTGFDAVWMSQFLDCF---SEEEVISILTRVAQSIGKDSKVYIMETLWDRQR----YETASYCLTQILYFTAMANGSKMFHSDRCIENAGLEVEEIQDN-------------------------- | |||||||||||||
10 | 2obfB | 0.16 | 0.13 | 4.25 | 0.84 | MUSTER | ----------PD------SAPGQAAVASAYQRFEPRAYLRNNYAP-PRGDLCNPNGVGPWALRCLAQTFATGEVSG--------RTLIDIGSGPT-----VYQLL---------------SACSHFEDITMTDFL--EVNRQELGRWLQEEPGAFNYSQHACLIEGKGECWQDKEVKRVLPIDVHQPQPGAGSPAPLPADALVSAFCLEAV-SPDLASFQRALDHITTLLRPGGHLLLIGALEE-SWYLAGETVVPVSEEEVREALV---------------RSGYKVRDL---RTYIMPAHLQTGVDDVKGVFFAWAQK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |