Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | IGSQAFNFLWQAAYGNKEPQKLLSIVLDMAAMPEELSGDLQENQELVHRFSDDLAPDNTFWHEFSLLVQEIFPKDTLSAKTNFAKRIHQFRYVISSQQAQWIRDHLRNEKMTDSQALARFLRKKKRKVWYHPTYDYTLYDSARLHNKVAFKDGQMIYPDDSYRLNFKVLLNFHTEFILDNEGHFLNEIDAEHITQNGIINGASFNYANSGNQRHWELDVNPTKSHDPLFRDAVIATKDLRFTAPKYILKKIEAASEEDWQKSYFNKKGLY |
1 | 6aukA | 0.12 | 0.11 | 3.90 | 0.72 | SPARKS-K | | ACFCYPHLENDSYKFIPFNNLAIKAMLTADKFYDSIIYGIAPPPQFKKRYNTNMNFETIMFTKVAMLICEALNSLKVTQANVLSRVV-------SIRHLENLVIRKENPQDLLLKSTLIAIGQSKEIETTITAEEIVFQNAAFTMWKLTYLEHQLMPILDQNFIEYKVTLNYNFAVITHGKGHY------------RIVKYSSVNHADRVNNDFNLLDQRIIWQNWYAFTSSMKQGNTL-----DVCKRLLFQKMKPE-KNPF---KGLS |
2 | 3kz9C2 | 0.10 | 0.04 | 1.67 | 0.71 | FFAS-3D | | --VRQFSNFLSDNDLDLHAKENIANITNAIELVVQDNHWLKVWFEWSASTRDEVWPLNRTNQLLVQNFIKAIERGEVCDQHNPEDLANLFHGICYSLFVQA-------NRTNNTAELSKLVSSYLDLCIYKREHE--------------------------------------------------------------------------------------------------------------------------------------- |
3 | 5vfbA | 0.18 | 0.14 | 4.56 | 0.35 | HHpred | | ---------------------------------RVQVGGLQVAKVL-FDFVNEAIPADTFWTGAEAVINDLAPK---------NKALLAKRDELQAKIDGWHQARAG--QAHDAVAYKAFLEEIG----------YLLPEAEDFQAGTQNVDPQLVISEEGKGYNKVRLEGSHTSYSVK-NGALVVALKN--GSETGLKNAGQFAFAKPHNGLHFEIQIDPSSPTDRNWLGLMKGDLAEEVS---KGGST--FTRTMNPDRVYTRADGS- |
4 | 6etxG | 0.12 | 0.11 | 3.95 | 0.79 | MUSTER | | KPYHISKFIYRHGQIRVFNHSRDRWLRVLSPFAP-----DYIQRSLFHRKGINEESCFSFLRFIDISPAEMA---NLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEG----ESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQV--VHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLIT |
5 | 5a22A | 0.05 | 0.04 | 1.67 | 0.65 | CNFpred | | --WDGVLEMLTSCQAPISTSQMHKWMGSWLMSDN---HDASQGYSFLHEVDKEAEITFDVVETFIRGWGNKPIEYIKKWTDSFKILAYLCQKFLDLHKLTLILNAV----EVELLNLARTFK-----------------------GKVRRS----------GTNICRIRVPSLGPTFISEGWAYFKKL-------DILMDRNFLLMVK-----VLSMVCRIDNLFSEQDIFSLLNI---------------------------------- |
6 | 1vt4I | 0.17 | 0.15 | 4.85 | 0.98 | HHsearch-2 | | ILSKEIDHI-IMSK--DAVSGTLRLFWTLLSKQEE---MVQKFV------EEVLRINYKFLMSPIKTEQR-QPS-------------MMTRMYIEQRDRLYNDNQVF--AKYNVSRLQPYLKLRQMKIFWLRLLKSKPYENCLLVLLNVQNAAWNAFN-----LSCKILLRFKTHISLDHHSMLLKYLDCRPQTTNTTIIESSLNVLEPAEKMFDRLSVFPPSAHIPTILLSLI------WFDVIKSDVMVVVNKL--HKYSLVEKQPKE |
7 | 6aayA1 | 0.08 | 0.08 | 3.16 | 0.79 | Neff-PPAS | | -SENFFDAIFKENISLVEYERYVKLLSDYFPARLLDKKEVP-IKERKENFKKNFKGIIKAVRDLRNFYTHKEHGEVEITDEIFGVLDELKSTVLTVKKKKVKTDKTKEILKKSIEKQLDILCQKKLEY-LRDTARKIEEKRRNQRERGEKELVAPFKYSDKRDDLIAAIYNDAFDVYIDKKKDSLKESSKAKYNTKSDPQQEEGDLKIPTKQEIHAFKSKIAGF-------KATVIDEATVSEATVSHGKNSICFATHEIFSHLAYKKLK |
8 | 4wd3A2 | 0.22 | 0.06 | 1.87 | 0.41 | HHsearch | | ---------------------------------------------------------------------EEFHCDTLYADGEIFVSIS--KYTIQGS----FI--LSQ-NDPVYAEILELQKSVAQ--------------------------------------AFRITDPGHLEIYRTHSGELIGEIA--------------------------------------------------------------------------------- |
9 | 3by9A | 0.08 | 0.07 | 2.60 | 0.80 | SP3 | | --------RFQYQALLNEHQSQLDRFSSHI------VATLDKYAHIPHLISKD--------KELVDALLS------AQNSAQIDITNRYLEQVNEVIQAAYL---IDRFGN---------TIASSNWNLDRSFIGRNFAWRPYF--YLSIAGQKSQYFALGSTSGQRGYY--YAYPVIYA-AEVVKDLSAGWQNKSSATD--------DHQSSQPAWLFHSVADLSPAQLNDIRQSQQYLDSPIPSLGWQGDLQAEQEWRKPEKHWLQDD |
10 | 5xn7A1 | 0.08 | 0.07 | 2.62 | 0.82 | PROSPECTOR2 | | EGFEVRSTILLDNPQQKSIERFILANFDNFEQPDEKANVELSVTELLDAAHVSGKVRGESYQQVIDALTEYHTAEHADYELTSVEKLLNLRKQVEGYVLG--HPDSGRVQANALLNQVNSRLEAVSVLVVSEQSIKAHDSFSHLYDQLDNANLKESK-----------------HLYLDGNGDFV---------------------TKGKGNLANIDKLGGSDAVLEKVKAAVSHE--------YGQVVADTIFAGLSANDLAKDGKGIH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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