Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | IFGKKNYKFMLIGLAIIILGFILMSGGGSDDPNVWNPDVFSWRRIRLAPTLVLIGFGIEVYAILLNP |
1 | 4xydA1 | 0.16 | 0.16 | 5.43 | 1.25 | SPARKS-K | | ILPFNIVRMLHTNSLIVWLLLGFMGAAYFVIPEESEREIHSPLLAYLQLAIMVLGTLGVVVTYLFNL |
2 | 5awwG | 0.16 | 0.16 | 5.43 | 1.41 | MUSTER | | DLLYTLVILFYLGVAGLLVYLVLVQEPKQGAGDLMSADLFSARGLYRLTVILGVVFAALALVIGLWP |
3 | 3v5sA1 | 0.11 | 0.10 | 3.78 | 1.17 | Neff-PPAS | | --VILGVGYFLLGLILLYYGSDWFVLGSERIARHFNVPSV-VFSLVLLIIGLIGVLVGAELFVDGAK |
4 | 5wcoA1 | 0.15 | 0.15 | 5.00 | 1.20 | SPARKS-K | | PKPRELIRHALKPEVVYAMGVLLTLGGESGLTVEFPVPEGKTVKVTL--NQLVNGMISTLYCVMKDP |
5 | 6i1rA1 | 0.13 | 0.12 | 4.15 | 0.61 | FFAS-3D | | ----QNVQLYTFGVIFNMGWLIYGDFKAGFELGPWWQRLFNGYSITTWMVVFNLGSTGLLVSWLMK- |
6 | 5tcxA | 0.20 | 0.15 | 4.76 | 0.30 | HHpred | | -LFVFNFVFWLAGGVILGVALWLRH----P--N----T-----FYVGIYILIAVGAVMMFVGFLG-- |
7 | 3v5sA1 | 0.20 | 0.18 | 5.72 | 1.41 | MUSTER | | VI--LGVGYFLLGLILLYYGSDWFVLGSERIARHFNPSVV------FSLVLLIIGLIGVLVGAELAK |
8 | 4he8G | 0.16 | 0.13 | 4.48 | 0.76 | CNFpred | | --KDFKTLLAYAGLSHMGVAALGVFSG--------TPEGAMGGLYLLAASGVYTGGLFLLAGRLYER |
9 | 5tcxA | 0.20 | 0.15 | 4.79 | 0.39 | HHsearch-2 | | LLFVFNFVFWLAGGVILGVALWLRH----P--N----T-----FYVGIYILIAVGAVMMFVGFLG-Y |
10 | 2xndJ | 0.17 | 0.16 | 5.40 | 1.09 | Neff-PPAS | | -AKFIGAGAATVGVAGSGAGIGTVFGIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILF- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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