Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | VDLFYIYPTVYDEDGGEDFAKIDDPVVRKLAQLVYSKTGSSIGAFTNVYAPYYRQTNLAKAAEMSAEEYEKFNTGIPRTDIYAALDEYFEKYNDGRPFIFAGHSQGSCMIEIILGDYMQAHPEYLDRMIAAYAIGFCVTTDWLEEHPYLKFAEGADDTGVIISWNAEGAGNKAAGETLIVKKNAVSINPITWTR |
1 | 3hc7A1 | 0.14 | 0.12 | 4.03 | 1.00 | MUSTER | | PWLFTVHGT-----GQPDPLGPG----------LPADTARDVLDIYRWQPIGY----------PAAAFPMWPSVEKGVAELILQIELKLDAD-PYADFAMAGYSQGAIVVGQVLKHHIGRLHRFLHRLKKVIFWGNPMRQKGFAHSDEWIHPVAAPDT------LGILEDRLENLEQYGFEVRDYAH-GDKWPH |
2 | 3hc7A1 | 0.10 | 0.07 | 2.69 | 1.18 | SP3 | | -------------SKPGQPDPLGPGLPADTARDVLDI------------------YRWQPIGNPAAAFPMWPSVEKGVAELILQIELKLDADPYAD-FAMAGYSQGAIVVGQVLKHHILPPHRFLHRLKKVIFWGNPMRQK--GFAHSDEWIHPVAAPD--------TLGILEDRLENLEQYGF---------E |
3 | 5x88A | 0.08 | 0.07 | 2.82 | 0.86 | SPARKS-K | | ITFIFARGS-----TEPGLMGIT------VGPDTCDELNREFRGRVACQGVGY----------EASLAGNFLPRGTTIDEAAELFNLAHTKC-PNTQIVGGGYSQGAAVMHGAIPGL---SNAVKDQIKGVVLYGDTRNEQDGGRIPNFPTDKTNIICNPGDLVCDGTLILTAAHFTYGTRVRGAVDWLEDRLS |
4 | 5x88A | 0.09 | 0.07 | 2.52 | 0.73 | FFAS-3D | | ITFIFARGSTEPGLMGIT-----------VGPDTCDELNREFRGRVACQGVGY-EASLAGNFLPRGTTQAAI------DEAAELFNLAHTKCPNTQ-IVGGGYSQGAAVMHGAIPG---LSNAVKDQIKGVVLYGDTRNEQDGGRIPNFPIC-NPGDLVC---------------------------------- |
5 | 2zyrA1 | 0.10 | 0.08 | 3.02 | 0.55 | HHpred | | RPVVFVHGLAGSAG-------------------QFESQGMRFAANGYVKTFEYDTISWALVVEDPESKSRERLIDETFSRLDRVIDEALAESG-ADKVDLVGHSMGTFFLVRYVNS----SPERAAKVAHLILLDGVWGV------------DAPEGIPTLAVFGNPKALPALGLPEKVVYNATNVYFN----- |
6 | 5dwdA | 0.19 | 0.16 | 5.18 | 0.93 | MUSTER | | LSGPMLPA----VSGAAK-YGSDGRDLIALGQFWRDS-----FPDTMFVAPNAPYEWFPLDLERDRTLARLAGAETAHPVLDAFLADLWAQTGLGADTILVGFSQGAMMALYTGLR----LPEPLKAIIAFS--GLIVAPEKLEAEIASKP--------VLLIHGDLDDVVPVIGSETLGIDARLHI---TIAQ |
7 | 1k8qA | 0.18 | 0.11 | 3.70 | 0.88 | CNFpred | | PVAFLQHGLLASA--TNWISNLP------------NSLAFILADGYDVWLGNSRGNTWARRNL-DSVEFWAFSFEMAKYDLPATIDFILKKTG-QDKLHYVGHSQGTTIGFIAFST----NPKLAKRIKTFYALAPVATVKYTE-------------------------------------------------- |
8 | 2zyrA1 | 0.11 | 0.10 | 3.50 | 0.47 | HHsearch-2 | | RPVVFVHGLAGSA--GQF-----------------ESQGMRFAAGYPVKTFEYDTISWALVVETLFGLSRERLIDETFSRLDRVIDEALAESG-ADKVDLVGHSMGTFFLVRYVNS----SPERAAKVAHLILLDGVWGVDAP---EGIPTLAVFGNPKALPALGLPEEKVVY-NATNVFTHVQLCTSPETFAV |
9 | 3cn7A | 0.13 | 0.11 | 3.78 | 0.98 | Neff-PPAS | | ACIIWLHGLGADRTD----------------FKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWPARAIDEDQLNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRYAQ------PLGGVLALSTYAPT-----FDDLALDERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHD |
10 | 3gbsA | 0.07 | 0.06 | 2.31 | 0.58 | HHsearch | | ITFIFARASTEPGL-LGI---STGPAVC----NRLKLA-R--SGDVACQGVG------PRYTADLPSALPEGTSQAAIAEAQGLFEQAVSKCP-DTQIVAGGYSQGTAVMNGAIKRL---SADVQDKIKGVVLFGYTRNAQERGQ---IAN--F--PKDKVKVYCA--------------VGDLVCLGTLIAP- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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