Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MRELKVIGLSADGKRVICQDANGTDKFAIDADDRLRAAARGDLSRLGQIQIEMESSLRPREIQARIRAGATVQQVATAAGVDVSRIERFAHPVLLERQRAAEMASAAHPVRNDGPAVSTLADTVAGAMFARGGDPDAIEWDAWKVEDGRWTVQLQWRTGRSDNKAHFRY |
1 | 5cwqA2 | 0.12 | 0.08 | 2.93 | 0.68 | SPARKS-K | | ------------------------SEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGN-----KEEAERAYEDARRVEEEARKVKAEEQGDSEVKRLAEEAEQLAREARRHVQECRGGWLEHHH---------------------- |
2 | 5o8yA | 0.12 | 0.08 | 2.70 | 0.68 | FFAS-3D | | --SIIVLTMNNNPAILSAVLDLDIEGIVLKLPKALAALQKGKLLEKISAGGYGDKRLSPKEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKDIALLNYLSSV-------------------------------------------------------------- |
3 | 3g7dA | 0.15 | 0.09 | 3.00 | 0.38 | HHpred | | ----SYSL-AGDAPARIVSYT-AQSPLT-EANNGAFEEALKAL----------SGKVSAGSDLFLARRAHTRTSAAEAAGVPPADLEAALRTGLTVLRTLGR-ALGFDYRVLLPADDQGV------------------------------------------------- |
4 | 5mogA | 0.12 | 0.11 | 3.98 | 0.64 | MUSTER | | FGELGIRLQWKEHSMIFAMPNKPGEFSRFDFPNGIWAILRNNEMLTWPEKVKFALGLLPAMVQAYVEA-FTVSEWMKKQGVPDRVNDEVFIAMSKALNFMQCILIALNRFLQEKHGSKRLCMPIVDHVRSLGGE--NSR-QKIELNPDGTVKHFALTDGT-----QITG |
5 | 5vfzA | 0.15 | 0.10 | 3.38 | 0.53 | CNFpred | | IAQIKGEHLDLIERTMTVTGK-GNVTATLPLHHRVVEIAYQMPRRGHWFPGPDRGHQRRESVSGTI------KEAMIRAGVVG--------SAHCLRHWFGTALLEA-----------VDLRTVQELMRHQSLTSTEI------------------------------- |
6 | 3qp6A2 | 0.12 | 0.05 | 1.87 | 0.42 | HHsearch-2 | | ------------------------------------------------PASPSNMPLSQREYDIFMSRGKTNWEIATILNISERTVKFHVANVIRK----------LNA--------NNRTHAIVLGMHLAMTPRELVN------------------------------ |
7 | 2qibA | 0.08 | 0.08 | 3.00 | 0.61 | Neff-PPAS | | YEAALQRASDDLADRFVEPRQGPLGARLLRVGRYFDFVDEHGPGFSALRGGPAVGSTTTNALVDSVRQ-AAYVQILSHLDVPPARLELVVRSWISLAESTALLWLD-----GRRIPRAELETQLVHDFAALAVSAAY-------DEEGALVRRVLADEPEDGPFGDLVD |
8 | 1gdtA2 | 0.05 | 0.01 | 0.57 | 0.42 | HHsearch | | ---------------------------------------------------GRKRKIDRDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN--------------------------------------------------------------------------- |
9 | 5vfzA2 | 0.16 | 0.11 | 3.75 | 0.79 | SP3 | | IAQIKGEHLDLIERTMTVTG-KGNVTATLPLHHRVVEIAYQMPRRGHWFPGPDRGHQRRESVSGTIKEGVDLRTVQELMRQSLTSTEIATR---VTDQRRAEGIERLDPFRTRVTDR--LLAQIAE------------------------------------------- |
10 | 2nd4A | 0.09 | 0.08 | 3.17 | 0.60 | PROSPECTOR2 | | GEN------PSASN----QLIQKKYVSWRDAADEANTQVAAHEAEIKEETLRQPGVVAAQQALDKANAIVGHDHEQAVKRAQEDYNTAYNEAYNTVRNRYIQVLQNYYDETAVEANRTNEQRIADDIKAQTGKDVDENGNYVVKDEKGNVVATVD-KDGKTVKADAKAG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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