Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LAGDIVCVVVFCAIGRRSHAEGLTLAGIAETAWPFLSGTVAGWLISRAWRAPTAIAPTGVIVWLCTVVVGMLLRKASSQGVAVSFIIVASVVTAVLLLGWRGVA |
1 | 5wudA2 | 0.18 | 0.16 | 5.31 | 1.32 | SPARKS-K | | LYADAIGLGAFASSGASLAYSNNVILVVIVGAITAVGGGVIRDILPLILTREF--------YATTAVIGSFVYFIASDLSVP---EDVALIVSFLITLILRILA |
2 | 5wudA2 | 0.17 | 0.15 | 5.06 | 1.13 | MUSTER | | LYADAIGLGAFASSGASL-SNNVILVVIVGAITAVGGGVIRDILS----EVPLILTREFYATTAVIGSFVYFIASDLSVP-----EDVALIVSFLITLILRILA |
3 | 3o7pA2 | 0.10 | 0.10 | 3.60 | 1.02 | Neff-PPAS | | AAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDGNIPTAELIPALCFAVIFIFARFRSQ |
4 | 5wudA | 0.15 | 0.15 | 5.15 | 1.19 | SPARKS-K | | DIFNYIGIVAFAISGAIKAVKKTPPTNLLLYADAIGLGAFASSGASLAYSVSNNVILVVIVGAITAVGGGVIRDILSNEVPSFVYFIASDIVSFLITLILRILA |
5 | 2b6pA | 0.06 | 0.06 | 2.55 | 0.71 | FFAS-3D | | ICAEFFASLFYVFFGLGASLRWAGPLHVLQVALAFGLALATLAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLGVSVGQATIVEIFLTLQFVLCIFATY- |
6 | 4n7wA | 0.17 | 0.16 | 5.38 | 0.20 | HHpred | | -VSTLVGVFATPLLTRLDATISVDVVGMLIVVIPITAGLVIHHTFTKTVKRIEPYLPAM-SMVCILAIISAVQSHIASVG-FVVIIAVILHNGIGLLSGYWGG- |
7 | 5cwmA1 | 0.10 | 0.10 | 3.60 | 1.05 | MUSTER | | KRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELA |
8 | 6f34A | 0.08 | 0.08 | 3.02 | 0.92 | CNFpred | | GIGAIIGTGIFVLTGVAAAEHAALVLSFILSGLACVFAALCYAEFASTVPVS--GSAYTYSYATFGELIAWILGWDL----ILEYGVASSAVAVGWSGYFQGLL |
9 | 4hg6A | 0.10 | 0.10 | 3.56 | 0.69 | HHsearch-2 | | RMMFLVAPLIYLFFGI--EIFVATFEEVLAYMPGYLAVSFLVQNAL--FARQRWPLVSEVYEVAQAPYARAIVTTLLAKPIYRPLLFTFLCLSGVLATLVRWVA |
10 | 4zowA2 | 0.12 | 0.12 | 4.12 | 0.94 | Neff-PPAS | | IMGGWPIMIGLLVAAAATVISSHAYLWMTAGLSIYAFGIGLANAGLVRLTLGTVSAAMGMLQMLIFTVGIEISKHAWLNGGNGLFNLFNLVNGILWLSLMVIFL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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