Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | VVRCESKDMARVHCDMDTEHGVQLVRQLSETSCIRGSEWDIERDGVWVEQGCRAEFASARVLTAPQMRRVVRCDSNGSKVACPVILRGAPVRLLRQRSVWPCKEGRSWGTRRNEIWVSRGCDGEFEVGAEDGSGFVDMPRTLTCESKSRSRRMCGVSVERSVRLRKQISGSPCVEGQTWGWSRDGVWVNDGCRAEF |
1 | 2ixqB | 0.11 | 0.07 | 2.60 | 0.78 | SPARKS-K | | -----------EECQVRVGD--LTVAKTRGQL-TDAAPIG----PVTVQAGC------------NARQVALKADFEQGKFFLISDNNRDKLYVNIRP-----MDNSAWTTDNGVFYKNDVGGTIGIYVDGQQTNTPPGNYTLTLTGGDNKQGFTPSGTTGTTKLTVT----------------------------- |
2 | 4gk9A | 0.18 | 0.15 | 5.00 | 0.47 | FFAS-3D | | -LNIKSGDGGRTLTGTVGEGPIGFRATLTQSNTYAGSSAPWHPGGTWV-IGCRVALDIESGDQGATLAGTMTYAGEGPIGFKSQQADGGVYAVENQWG------GSSAPWHNGGVWV--------------IGARDQAVVAVSIGSTDSGKTNMTYAGEGPIGFKGNSVAGNNYAVNQWGWHPGGIWL-LGCR--- |
3 | 3lb6C2 | 0.13 | 0.04 | 1.41 | 0.18 | HHpred | | ---------------------------------------------------------------------------------------------------------------------------------SPQGIPET-VQDMDCVYYNWQYLLCSWKPGTNYNLFYWYEGLQCVDPYASDYKDFYICVNGS----- |
4 | 2vbeA4 | 0.14 | 0.12 | 4.01 | 0.70 | MUSTER | | --------------CIGFKNAVYVCLDLHEQLDLD-----CGSTGVVIEN-VNGGFSFSNSWIAADADGTEQFTG--IYFRTPTSTQSHIVSGVHINTANKNTAANNIAIEQSAIFVFSGCTLTGDEWAVNIVDINECVSFDKCIFNKPLRYLRSGGVSVTDCYLAGITEVQKPEGRYNTYRGCGV---------- |
5 | 2gvuA | 0.09 | 0.06 | 2.16 | 0.91 | CNFpred | | ---------------------GSIYCFTTDGQMIQVDTAFQFPNGIAVRHRPYQLIVAETP----KKLWSYDIKG-NKKVWGHIP-EGGANGMDFDE------DNNLLVANWSHIEVFG-PKMRIRCPF-------EKPSNLHFKP-QTKTIFVTEHENNAVWKFEWQ---------------------------- |
6 | 2kjxA | 0.19 | 0.06 | 1.97 | 0.58 | HHsearch-2 | | ---------------------------------------------------------------------------------------------GSGMKEFPCWLVEEF-------VVAEECSPNFRAKTTPECGPTGYVEKITCSSKRNEFKSCRSALM------EQR---------------------------- |
7 | 3j0fI3 | 0.06 | 0.06 | 2.48 | 0.93 | Neff-PPAS | | KIPC------TVYDRLKETTAGYITMHRPRPHAYTSY-LEESSGKVYAKSGKNITYECKCGDYKTGTVSTRTEITGCTAIKQCVAYKSDQTKWVFNSPDLIRHDDHTAQGKLHLPFKLIPSTCMVPVAHAPNVIHGFKHISLQLDTDHLTLLTTRRLGANPEPTTEWIVGKTVRNFTVDRDGLEYIWGNHEPVRVY |
8 | 1iycA | 0.23 | 0.04 | 1.12 | 0.23 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------------------------------ELPKLDDKVL--IRSRSNCPKGKVW--------NGFDCKSP- |
9 | 1w8nA1 | 0.14 | 0.11 | 3.82 | 0.74 | SP3 | | QLRYGPHAGRQQYTIINAAGAFQAVSVYSDDH---GRTW-----------------RAGEAVGVGMDENKTVELSDGRVLLNSRDSARSGYRKVAVSTDG----GHSYGPVTRDLPDPTNNASIIRAFPDAPAGSARAKVLLFSNAASQ-------TSRSQGTIRMSCDD-----GQTWPFQPGSTALPDG----- |
10 | 1moeA | 0.10 | 0.09 | 3.44 | 0.80 | PROSPECTOR2 | | DIVLTQSPASLA---VSLGQRATMSCRAGESVDIFGVHWYQQKP----GQPPKLLIYRASNLESGIPVRFSGTGSRTDFTYCEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTCAPFGYYVSDYAMAYWGQGTSVTV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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