Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | IYLLLAIAGAILPWQANLEFMQANGDPLALMQFIQDANANAAARSLSRDLLIGASAITIWIAVEGRRLQMKGWWITLIACVMISFACGAPLFLHLRER |
1 | 3l1lA | 0.12 | 0.12 | 4.31 | 0.96 | SPARKS-K | | YGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYDPWVLTITCVVVLWIFVLLNIVGPKMI |
2 | 5tj6A | 0.06 | 0.06 | 2.63 | 0.62 | FFAS-3D | | -FLASSLVTFGSGLVVIIIYIVLWGWMTEAKDWAGELISGQTTTGRILVGLLSIASLIIYFIDASTNSSSTTQQVDLAFNVFFMIYFFIRFV-AANDK |
3 | 1zcdA1 | 0.18 | 0.15 | 4.98 | 0.27 | HHpred | | ILIIAAILAMIMGATSWYHDFLETGSNKNMRELMQGSLAT---NDLSMALGVAAVAIAV--LAVLNLCGARRTGVYILVGVVLWTAVL---------- |
4 | 5ezmA3 | 0.07 | 0.06 | 2.59 | 1.02 | MUSTER | | GKQLIGMAIVAACGLLASPVVATLNANHI------PNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGHETVGRPA |
5 | 6f34A | 0.09 | 0.09 | 3.48 | 0.88 | CNFpred | | TMLGIGAIIGTGIFVLTGVAAAEHAGPALVLSFILSGLACVFAALCYAEFASTVPVGSAYTYSYATFGAWILGWDLILEYGVASSAVAVGWSGYFQGL |
6 | 1e6dM | 0.11 | 0.10 | 3.65 | 0.68 | HHsearch-2 | | SLGVLSLFSGLMW-FFTIGIWFWYQAGWNPAVFLRDLFFEPPAPEYGLSSFFMFVAVWSWWGRTAQALGMGKHT---------AWAFLSAIWLWMVLG |
7 | 4q2eA1 | 0.08 | 0.08 | 3.20 | 0.89 | Neff-PPAS | | LIGLVSAILILAGYELITLEMKERDARFFYVILLALYPVLYGLVFEEPTQPLSILFITGVVFSLITDKDPSQVFKTVAAFSIALIYVTFFLSFFLPIY |
8 | 1eysM | 0.11 | 0.10 | 3.69 | 0.76 | HHsearch | | LTGTLIFFGLVAISIIGFNMLASVH--WDVFQFLKHFFWEPPPPQYGWLGLFLTLSILLWWVRTAEALGMSQHLSW---AFAAAIFFYLVLGFIRPV- |
9 | 2p4qA2 | 0.09 | 0.08 | 3.10 | 0.76 | SP3 | | ALYASKIISYAQGFMLIREAAATYGWKLNNPAIALMWRGGLLFNKFFADAVTKAQSGWRKSIALATTYGIP----------TPAFSTALSFYDGYRSE |
10 | 5ezmA3 | 0.08 | 0.07 | 2.86 | 0.58 | PROSPECTOR2 | | GKQLIGMAIVAACGLLASPVVATLNANHIPNSFYRAYA-------VWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGTVGRPAS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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