Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | IESYEDEREVLRKIEELKALGYAESDMCVLARSSEQLTKIRTRTNVAYHAAEGRGMGRFGMFIRSRYVFSCINEDEVKAKEIADLYQHLSEGEIL |
1 | 6btmD | 0.11 | 0.11 | 3.82 | 1.03 | HHsearch-2 | | YAIYNDDDVLMNAVKKTRAAHHHIEEVF--TPFPVHLDKMGAPTRLAICAFLYGCVGISVATTMGHLMVITFYMRSLWPFKAENPDVRTTDDHFL |
2 | 6btmD | 0.10 | 0.09 | 3.53 | 1.51 | HHsearch | | YAIYNDDDVLMNAVKKTRAAHHHIEEVF--TPFPVHLDKMGAPTRLAICAFLYGCVGISVATTMGHLMVITFYMRSLWPFKAENPDVRTTDDHF- |
3 | 3q2oA1 | 0.15 | 0.14 | 4.62 | 0.80 | SPARKS-K | | IGIIGGGQLGRMMALAAKEMGYK---IAVLDPTKNSP--CAQVADIEIVASYDD-LKAIQHLAEISDVVTYE-FENIDYRCLQWLEKHLPQGSQL |
4 | 6btmD | 0.11 | 0.11 | 3.84 | 0.71 | FFAS-3D | | YAIYNDDDVLMNAVKKTRAAHHHIEEVFTPFPVHGLDKAMGAPTRLAICAFLYGCVGISVATTAHLMVITFYMRSRLPFKQAENPDVRTTDDHFL |
5 | 6btmD | 0.11 | 0.11 | 3.82 | 0.81 | HHpred | | YAIYNDDDVLMNAVKKTRAAHHHIEEVF--TPFPVHLDKMGAPTRLAICAFLYGCVGISVATTMAHLMVITFYMRSLWPFKAENPDVRTTDDHFL |
6 | 2lndA | 0.12 | 0.12 | 4.12 | 0.84 | MUSTER | | LVISTDTNIISSVQERAKHN-YPGRYIRTATSSQDIRDIIKSMKDNGKNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLKTAGSL |
7 | 4c2uA | 0.15 | 0.14 | 4.61 | 0.60 | CNFpred | | ------GDYVADWLTRLHGEGRAWSEMAILYRTNAQSRVIEESLQIPARIV-RREIRDILAYARLALNDDVALRRI-GDTALQKLMEWARTHHTS |
8 | 6f0kD | 0.11 | 0.11 | 3.80 | 1.01 | HHsearch-2 | | LAEFSDPAALLHAARQVRKAGYRHFDAH--SPFPI--HGMDEASKVAFIFFTGTIAGFALAWWMQLAGVATMLALNLPRPYNPLFYMRVTDDGFF |
9 | 5cwmA1 | 0.12 | 0.12 | 4.13 | 0.74 | Neff-PPAS | | KRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAAR |
10 | 6f0kD | 0.11 | 0.11 | 3.79 | 1.48 | HHsearch | | LAEFSDPAALLHAARQVRKAGYRHFDAH--SPFPI--HGMDEASKVAFIFFTGTIAGFALAWWMQLAGVATMLALNLPRPYNPLFYMRVTDDGF- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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