Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | QLWWAAKEMQRGKKLQDYIGRNEKTKLVVKIQKKGQGAPAREPVITDEQQKQMMMHYYRRQEELKKLEEADDDSYMDSEWSDRQALKRQFQGLTNI |
1 | 3ln6A3 | 0.12 | 0.08 | 2.93 | 0.86 | SPARKS-K | | ----FGDEFTDRKEALNYFSQIQDKPIVVKPKSTNFGLGISKTSANLASYEKAIDIAFTEDSAILVEEY--------------------------- |
2 | 3tixA | 0.10 | 0.09 | 3.50 | 0.52 | FFAS-3D | | TFLYDGIEIQADQTPEDL-DMEDNDIIEAHREQIGGLPPENHGTSRRSATVSLERVHELFTEHLSNLKNRREKRQELAEEAEMLSQRKLLAAVD-- |
3 | 1oqyA | 0.22 | 0.18 | 5.60 | 0.43 | HHpred | | KLIYAGKILSDDVPIRDY-RIDEKNFVVVMVTKTKAGQGTSAPPAYETMLTEIMSMGYERERVVAALRASYAVEYLLTGI---------------- |
4 | 2oa5B | 0.16 | 0.15 | 4.83 | 0.82 | MUSTER | | ------PDYEEVKEVERLKLENKTLK---QKVKSSGAVSSDDSILTAAKRESIIVSSSRALGAVARKIEAKVRSRA-AKAVTEQELTSLLQSLTDV |
5 | 3zqaA | 0.10 | 0.08 | 3.08 | 0.45 | CNFpred | | KLYIGGRYVEAGATFETINP--ANGEVLAKVQR-----------ASREDVERAVQSAVEGQKVWAAMTAMQRSRILR---RAVDILRERNDELAAL |
6 | 3q3fA | 0.20 | 0.20 | 6.33 | 0.58 | HHsearch-2 | | RTWRADINYTSGFRNSDRLYSSDWLIYKVKTLTGKTITLEVEPSDTIENVKAKIQDKEGDQQRLKQLEDGRLSDY-NIQKESTLHLVLRLRGGGQT |
7 | 2oa5B | 0.17 | 0.16 | 5.12 | 0.70 | Neff-PPAS | | -----DKTYEEVKEVERLKLENKTLK---QKVKSSGAVSSDDSILTAAKRESIIVSSSRALGAVARKIEAKVRSRAAK-AVTEQELTSLLQSLTLR |
8 | 2lxaA | 0.12 | 0.05 | 1.84 | 0.65 | HHsearch | | KLLLKGKVLHDNLFLSDL-KVTP-ANSTITVMIKPNLEHHHHHH---------------------------------------------------- |
9 | 2kdiA | 0.17 | 0.11 | 3.76 | 0.70 | SP3 | | RLIWAGKQLEDGRTLSDY-NIQRESTLHLVLRLRGGSMGG--AADEEELIRKAIELSLKESRNSGGY----------------------------- |
10 | 5dooA2 | 0.12 | 0.11 | 4.01 | 0.42 | PROSPECTOR2 | | DFYTTF-NIRPISPENKIDLNNEQENI----SFYYENLPEPFISTTSAIMKAILYVYAENEQVAKEAFKKLGK---YRLQDFLATLEQHFITLTKP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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