Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | WFDQITPLTQAHQNLLNNNLEAMFNSLVEVWQLEHNKNIQSHLNELLLQSLTVDCGKSLDKKPLPEWLKSITINRQEIQSPGRDAFHVDIEVDAEKPLADIRLAQWVDKSLSTDSLLTTTSSDSVTGKAHYLKRYNLNSKITMGLYRLDITAKDQQSWSAWIVLGEPKAKQIVRWASKDQWQIEKKALLNPYCPLPELNVSLYDYIDGKYSEIWSQRYESEYPNELEITNLAADRYVLAVSMTQQRWQGPIIIEQSQVISKTYD |
1 | 4es8A | 0.11 | 0.10 | 3.58 | 0.80 | SPARKS-K | | ---------------EELPDDLMNFKGTWEVSADGSSGRFFSKGATDSYVFHLIPAKDVKKPGWHNEVKDSYIKIDRYKTSTTAPYSVAFKVNTKSLIKTFEQGQIASGITVDIGSAFNKTTDDSSKYASNVKIEQGFKQREQGDKTISFRTLKEGPMSLVLLSKKPQGDLDVEFKNNKNVQLTLSDDGRTNFEGDEISLFN-----SRGELLQTVTVTKDQQNPISITSLKNKEK-LKVSIKQKQSKKDFFFEVGIDPKVEAK |
2 | 5a1wH | 0.09 | 0.09 | 3.30 | 0.65 | FFAS-3D | | --TKNSNILEDLETL---------RLFSRVIPEYCRALEENEISEDLIFAFDEIVALGYRENVNLAQIRKIEEKITLTCGRDGGLQNMELHGMDKFGRIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVWRLQTTEESFIPLTINCWPSESGNGCDVNIDNLELNDVVITIPLPSGVGAPVIGEGEYRHDSRRNTLEWCLPVIDAKNLEFSIPGQPNDFFPVQVSFISKKNYCNIQVTKVTQVD---- |
3 | 4fxgA5 | 0.08 | 0.04 | 1.67 | 0.30 | HHpred | | --------------------------------------------------------------------GHLFLQQ-PIYNPGQR-VRYRVFALPSTDTITVMVEN-SHGLRVRKKEVYM------PSSIFQDD-FVIPDISEPGTWKISARFSDGLNSSTQFEVKKCEGKLELSVDGAESVKLHLETDSLALVALGALDTALYAAGSKSHKPLNMGKVFEAMN----------------------------------------- |
4 | 5n8oA | 0.14 | 0.13 | 4.42 | 0.84 | MUSTER | | WQGEQRPATIISEPDRNVRYARLAGDFAASVKAGSGVREQAILTQAIRSELKTQ-GVLGHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRYVIDRVTAQSHSLTLRDAQGETQVSSLDSSWSLFRPEKM--PVADGE-RLRVTGKIPGL-------VSGGDRLQVASVSEDAMTVVVPGRAEPA----SLPVSDSPFTALKLENGWVETPGHSVSDSVTQMAMNATLNGLARSGRDVRLYSSLDETRTAKLARHPS |
5 | 4ufcA | 0.14 | 0.09 | 2.98 | 0.83 | CNFpred | | ------VLPVVRKLIFEGRNKEAQRLIDANFLT------QQHGMSYL-------------------TLGSLYLEFPEHQ--NGSGFYRDLNLE--NATTTTRYQVD--------------------DVTYTRTTFASF---TDNVIIMHIKASKANALNFTIAYNCPL-VHKVNVQ-NDQLTVTCQG-----KEQEGLKA--------------------------------ALRAECQIQVK-RPAGNTLQINEGTEATLYIS |
6 | 4s3pA1 | 0.14 | 0.05 | 1.55 | 0.40 | HHsearch-2 | | ---------------------------------------------------------RTATKVAVTPVPNVMVYTSG--KK----MPMVVE---GSGEYSWLLTT-EEGTQYK-GHVTG------------GKAFNLPTKLPEGYHTLTLTQD-DQRAHCRVIVA--------------------------------------------------------------------------------------------------- |
7 | 4es8A | 0.09 | 0.09 | 3.34 | 1.01 | Neff-PPAS | | WEVSADGSSGRFFSKGATD-SYVFHLIPAKDVKKPGWREHNEVKDSYIKIDKQSIAARYKTSTTAPYSVAFKVNTKSLIKDHDYKITFEQGQIASGITVDYRIGSAFNKT--TDDSFKISDESKYASNVKIEGEEQGFKQREQGDKTISFRTLKEGPMSLVLLSKVEKKPKNLKIIDVTNPSQLDKGVAYVGNKNVQLTLKSDDGFEGDEISLFNSRGELLQTVTVTKDQQNPNKEKLKVSIKQKQSKKTSKDFFFEVGIDPKV |
8 | 3d33A | 0.11 | 0.04 | 1.36 | 0.55 | HHsearch | | -----------------------------------------------------------PVKDVERWDDNCPIT-VFTD--G---YLLTLKNASPDRD-TIRITD-AKGGVVYENDIPE------VQS--AYITISI-ANFPAEEYKLEITGTPSGHLTGYFTKE--------------------------------------------------------------------------------------------------- |
9 | 5nrlH | 0.09 | 0.09 | 3.42 | 0.89 | SP3 | | FFTPATSLIFARRFLINERSRKRLQKEMERHQKFNTRQELLSRRTELQRMANLELAGSQLVST--KPISAVSLMVVATGSWAGDLQVLNSQTLQVGKIGAIDWHPDSNNQMISDGLIKNFQYSNEEGGLRLLGDLVGHERR---ISDVKYHPSGKSTHQELLLQEGHDKGFSLSFQCDGSWDIRSGSKVMAGHSKPIYTVAVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYD-----NLINVYSSDLKMGSLA |
10 | 3by9A | 0.12 | 0.10 | 3.46 | 0.91 | PROSPECTOR2 | | RFQYQALLNEHQSQLDYAHIPHLIKELVDALLSAQNSAQIDITNRYLEQVNEVI------------------------------------------QAADTYLIDRFGNTIASSNWNLDRSFIGRGQKSQYFALGSTSGQR---GYYYAYPVIYAAEILGVIVVKDLNKSSYFVATDDHQVVFSSQPAWLFHSVADLSPAQLNDIRQSQ--------QYLDSPIPSLGWQGDLQAEQSEWRKPEKHWLQDDYIVSSRPLLSPKI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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