Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | EIGNEEKIEAYYESAFRAFQQINCRQVAKAYIKIIEPRKQVKHPYNGGRGAPGEKGDPEKTKPDWWPTGVIHREPDHLKKPERIRLLVHIFRKLGKTHGITADKLEEAGRDAQRQIKPRERLDILDEIYKVRR |
1 | 5ic8A | 0.08 | 0.08 | 3.02 | 0.72 | SPARKS-K | | QNGDMQRARAHFLRGCRFCTPTLWLEYARCEMDWLARMEAKKDGLILPDPDAEGTDGTKKAAKPVF-DAEQTKKLEQSP-ALSGAIPIAVFDVARKQPFWGPAAAEKFFDVFAKFGHLSCHERIISHVVTTMQ |
2 | 4fgvA4 | 0.12 | 0.10 | 3.46 | 0.81 | FFAS-3D | | ---DVQTCNAFFNQFFIRILQDVFFVLLMRLFYFVH-PADGSAPKIQGPIYQPDQAQPGTG--------------------NREFLANFVGTLLQNAFNLTPLQITTFVKDCFELNTQYDKRVVLRDFLISLR |
3 | 1wijA | 0.22 | 0.17 | 5.20 | 0.62 | HHpred | | -------------FVLQDLQDATLGSLLSSLMQHCDPP-QRKYPLEKG------------TPPPWWPTGPPYRKPHDLKKMWKVGVLTAVINHMLP----DIAKIKRHVRQSKC-LQTAKESAIWLAVL---- |
4 | 2r18A | 0.12 | 0.11 | 3.96 | 0.89 | MUSTER | | --TPEEAQREKDTRISKKMETMGIYFATPEWVALN----GHRGPSPGQLQNTREIPDPNED-----YLDYVHAEKSRLASEEQILRAATSIYGAPGQAEPPQAFIDEVAKVYEINGPNQEQMKDLLLTAMEMK |
5 | 3p8cA | 0.11 | 0.08 | 3.00 | 0.57 | CNFpred | | --AEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPTDKY--------------------SNKDCPDSAEEYERANYTSEEKFALVEVIA---------MIKGLQVLMGRMESVFNHAIRHTVYAALQDFSQ |
6 | 1o57A | 0.17 | 0.07 | 2.23 | 0.47 | HHsearch-2 | | ----------------------------------------------------------------------------KFRRSGRLVDLTNYLLTHP-HELIPLTFFSERYESAKSSI--SEDLTIIKQTFEQQG |
7 | 2r18A | 0.10 | 0.10 | 3.57 | 0.68 | Neff-PPAS | | ---PEEAQREKDTRISKKMETMGIYFATPEWVALNGHRGPSPGQLKYWQNTR------EIPDPNEDYLDYVHAEKSRLASEEQILRAATSIYGAPGQAEPPQAFIDEVAKVYEINPNQEQMKDLLLTAMEMKH |
8 | 1wijA | 0.21 | 0.17 | 5.24 | 0.84 | HHsearch | | -----------SQFVLQDLQDATLGSLLSSLMQHCDPP-QRKYPLEKG------------TPPPWWPTGPPYRKPHDLKKMWKVGVLTAVINHMLP----DIAKIKRHVRQSKCKMT-AKESAIWLAVLNQQ- |
9 | 6bljA1 | 0.15 | 0.13 | 4.31 | 0.68 | SP3 | | DVTLVDKVIELDEVWRATIKLNHIKSFTGIISKEVGNRMKNKVPLGDDLELPKEVTDDVYALFT--KEALEQGSLAKLNTNQLKKLSTYITEVHIKNSEEEVKQKEKERDDVLLQI----------------- |
10 | 3l9oA2 | 0.14 | 0.14 | 4.65 | 0.60 | PROSPECTOR2 | | EVEDEENVKEYHEQAIKGYREDVRQVVTANALSFLQPAKRISAVYTIDSPVNLLKPFNPTLPEGIRPAEESICAPKDIRASGQKETVGKSLREVNRRFPDGFLKLMKKIDVLNTKLSSSRKHDLHEDMRKISE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|