Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | TTLKTAYTDTRASDLAWALGREPLPALAVLDLQLHGAQVQLRLLGASHQVLLEEEHGTCSETVACMPGSSTPLPLGVAKRLGDWEYEFAAHVETLSRGSFAGRAQELLALVAEHPHGLAGTFPGSPHAFTAMLAQCQQGQVRWRTWHAYPQEGRLVATRTRV |
1 | 6b9oA | 0.09 | 0.08 | 3.10 | 0.74 | SPARKS-K | | EDWPLEVTQPVAGNYYPLN--------LGIYTKDEKS--EFSVLVDRATGGASIKDGEVELMLHRRTIRGEPLDEQVCMTCEGLTVRGNYYLSIHKPAAGSRWRRTTGQEIYSPMLLAFTQENSLPPSVALITLEEDDGLVLLRLAHLYEPSEDAEYSTLTK |
2 | 3k44A | 0.11 | 0.07 | 2.69 | 0.65 | FFAS-3D | | --------------------------LATKMLQIQSKRFYLDV--------KQNRRGRFIKVAEIGADGR----------------RSQIYLALSTAAEFRDHLSSFSDYYASLDGKLKSEMMIKDYRRYYLDLKENARGRFLRVSQTITRGGSQIALPAQ- |
3 | 2iiiA | 0.11 | 0.05 | 1.77 | 0.33 | HHpred | | ---------------------------------------------------------------------------------KTLGLHILADLYGIRVEDIRELLEGAVKYA-NLTSSHYYQFQ--PHGATGVVLLA--SH---ISIHTWPEHGLATVDV--- |
4 | 4mboA2 | 0.09 | 0.09 | 3.26 | 0.77 | MUSTER | | ----NSPSVTEHTNVKTNVRSR----IMKLDDERQTETYITQINPEGKEMYFASGLGNLYTIIG-SDGSPVNLLNAEVKILKTNSKNLT---DSMDQNYDSPEFEDVTSQYTNDGSKITIDWKTNSTTSYVVLVKIPQSGVLYSTVSDINQTYGSKYSYGHT |
5 | 3rrsA | 0.08 | 0.07 | 2.89 | 0.75 | CNFpred | | --------------RYLYVNDGDVWTPSWLPVKADLDHFEARHGLGYSTITGERNGVRVETLFFVPVGENAEVQKVTVTNTSYKSLTLFSFVEFCLW--NAQDDQTNYQRNLSIGEVEVEQES--PHGSAIYHRTEYRERRDHYAVFAVNTQAEGFDTDRDT |
6 | 1vr7A | 0.11 | 0.05 | 1.78 | 0.60 | HHsearch-2 | | ---------------------------------------------------------------------------------KSLGRHLVAEFYECDRELIEQE-KQAAYES-GATTSTFHRF--LPYGVSGVVVISES----HLTIHTWPEYGYAAIDLFTC |
7 | 4mboA2 | 0.09 | 0.08 | 3.08 | 0.76 | Neff-PPAS | | --------------SPSVTEHTNVKTNVRSRIMKLDTETYITQINPEGKEMYFASGLGNLYTIIGSDGSPVNLLNAEVKILKTNSKNLTDSMDQNYDSEFEDVTSQYSYTNDGSKITIDWKTNSSSTTSYVVLVKIPQSGVLYSTVSDINQTYGSKYSYGHT |
8 | 2iiiA | 0.11 | 0.05 | 1.79 | 0.58 | HHsearch | | --------------------------------------------------------------------------------AKTLGLHILADLYGIRVEDIRELLEGAVKYANLTKSSHYYQFQ--PHGATGVVLLA--SH---ISIHTWPEHGLATVDVYT- |
9 | 1s9cG | 0.12 | 0.11 | 3.95 | 0.97 | SP3 | | GLAEIPGLSINFAKQYLELYKPLPR---AGKLKCEAVVADVLDKGSGVVIIMDVYELICHNQFSLFKRTSDKVKVAVAIPNRPPDAVLTDTTSLIDLCTFGFSARRVLQQFADNDVAVKARFPGQ---TLQTEMWKEGNRIHFQTKVQ--ETGDIVISNAYV |
10 | 4mboA2 | 0.07 | 0.06 | 2.59 | 0.60 | PROSPECTOR2 | | N----SPSVTEHTNVKTNVR-------SRIMKLDDEETYITQINPEGKEMYFASGLGNLYTIIGSDGSPVNLLNAEVKILKTNSKNLTDSMDQNYDSPEFEDVTSQY--SYTNDGSKITIDWKTNSTTSYVVLVKIPQSGVLYSTVSDINQTYGSKYSYGHT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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