Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | EFPTFENCNPNCPEEAFLWMYSGLPGMNGAPLPFPIEYLRQVSRRQWDCGARPPGSVIPPERKIKYQKPRNTDPHWLVSPGVWEPIDAPDRSQFDLNEFVASLSQDTRRQLAEALGFGP |
1 | 3uebA | 0.10 | 0.08 | 3.08 | 0.91 | SPARKS-K | | -------------------GSSGKRVIHIGLPELSEEQLIEIGELAQETIIDYLTRSEVKDIEVTMRINREETLD-LEIEVYLEV---PIFVKVDVDKLIDEAVERAYEIVERKLREIA |
2 | 5wwoA2 | 0.14 | 0.10 | 3.46 | 0.51 | FFAS-3D | | -VPALHRLPFSPPTTVFIKILLD------KKYALPYQTVDDCVYYFMRFRILDGSNGEDATRVL---------------PVIW-----HKAFLTFAQRYKNDITQDQRDFLLETV---- |
3 | 2ga5A | 0.17 | 0.12 | 3.87 | 0.31 | HHpred | | ------------------------QVVPQEVLNLPLEYLDHLLDSLEELDCIPDVEGQPPNKQIWLASPLSGPNRFDLLNGEWVSLRN----GTKLTDILT-------EEVEKAISKS- |
4 | 5ugqA | 0.13 | 0.13 | 4.36 | 0.69 | MUSTER | | DPIEAELRQAKGFQDAFNNYAADCAKNAGCPLGADPAKAVEVYHSLVDPLVDPDNPRISRP----ARTKDPRGLSYSDAIVGTIALYSPNLWQH-LTDGLSELVDNRGDTLLALADYRR |
5 | 1jqoA | 0.10 | 0.07 | 2.52 | 0.61 | CNFpred | | -------------MRYGMSYIHETV------WKGVPKFLRRVDTALKNIGINERLPYN----------------VSLIRFSSWMGGDRPRVTPEVTRDVCLLARMMAANLYIDQIEELM |
6 | 2hjqA2 | 0.13 | 0.03 | 1.17 | 0.38 | HHsearch-2 | | -------------------------------------------------------------------------------------KDD--PINYT-ESELKGMNKAEHESIISNLGRNP |
7 | 2mokA | 0.15 | 0.14 | 4.80 | 0.75 | Neff-PPAS | | -IPTWYYGEAQCDWDDFFPTLEEIDGDQEDYAEYFCDALGTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAID------EDRQPELTAERVEKWVKQISEELHLDEILNA |
8 | 2hjqA2 | 0.13 | 0.03 | 1.16 | 0.44 | HHsearch | | -------------------------------------------------------------------------------------KD--DPINYT-ESELKGMNKAEHESIISNLGRN- |
9 | 5u47A3 | 0.08 | 0.06 | 2.29 | 0.64 | SP3 | | ---------------------YQTGDIIGKT-------PGETANTLRQNLVHPI--VLGVGNKIEKVSVDAKENIKANEQILIMTNEFTELPDMY------GWTKKNVETFAKWKGIKI |
10 | 1yobA | 0.20 | 0.18 | 5.90 | 0.53 | PROSPECTOR2 | | ALPGLSSDAENESWEEFLPKIEGLDGDQVGYPENYLDALGELYSFFKDRGAKIVGSWSTD-------GYEFESSEAVVDGKFVGLALDLDNQSGKTDERVAAW----LAQIAPEFGLSL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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