Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | MWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSICNPGDNKDAMPIEQCTFDVETKNDLPSTVQLFYEESKDNEPLANIHFQAIGSGFLTFVNACQEHDDNSLKLFASLLISLSYSSAYADLSETVYINENNESYLKAQFEKLSQRDMKKYLGEMKRLADGGEMNFDGYLDKMSHLVNEGTLDPDILSKMRDAAPQLISFAKSFDPTSKEEIKILTDTSKLIYDLFGVKSEK |
1 | 4xl5C | 0.10 | 0.09 | 3.44 | 0.58 | SPARKS-K | | -KVEMYIKNLQDDSPPVRVYAAFALGKIAVEPLIKAL----KDEDASVRYTALGQIGDERAVEPLIKALKD---EDGYVRTAAAEALGRAVEPLIKALKDEDPWVRLTAARALGEIGDERAVEPLIKAL--KDEDPWVRLTAARALGQIGDERAVEPLIKALKDEDIGDERAVEPLIKALKDE--DEYVRQRAASALGKIGAAMEKLAEPAPG------FARKVAVNYLETHK-- |
2 | 1wqgA | 0.07 | 0.05 | 2.15 | 0.71 | FFAS-3D | | --IDEALFD-----------AEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATITQLASINVPEAR------LVVIKP--------------YEANQLRAIETAIRNSDLGVNPTNDGALIRVAPQLTEERRRELVKQAKHKGEEAKVSVRNIR-------RKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTQYVTQID-------ELVKHKEGELLEV------- |
3 | 4wvmA | 0.16 | 0.13 | 4.27 | 0.46 | HHpred | | --------------------------QGKMEAAIKKIPTILTDEEKSLASSCKFDFLLES-LPTTFETYQTLPTNSVPMLVQRIPLIHDKISNFQQIFQDYMLTVQKKIAEKLPLVR-EQSLQKIIDDRAQSPFSNEKVSKWLDAVERAVLKSCATELDREVLVGKVKNDPYLKVLSDYWESSCFSTEVVLKMQQRAQTFCDHVNDFE-KSRNVGFFITALE------------- |
4 | 5nvrA | 0.14 | 0.13 | 4.39 | 0.64 | MUSTER | | DLLKDVIRK-ARNETSEFLIIEKFLDKKTEVYAQNWVGSTLLPPNISFRENIVNKVPNENSIENFLDLCLKLSFPVNLFTLLHVSWSNNNFIYFIQSYVSKNENKLVDLITLLKTSLPGNLFSGLLPFLRRNKFLEYCIHSNPNLLNSIPDSDLLLKASYFAANKLFKCSEQLTLVRWLLKGQQ-----LEQLNQNFSEIENVLQN-ASDSEL------EKSEIIRELLH-LAAN |
5 | 1bk6A | 0.13 | 0.11 | 3.98 | 0.63 | CNFpred | | SVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGP---------QEAIQAVI----DVRIPKRLVELLSHE---STLVQTPALRAVGNIVTGNDLQTQVVIAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKT------KKEACWAISNASSGGLQRPDIIRYLVSCIKPLCDLLEIA------DNRIIEVTLDALENIIKMGEAD |
6 | 2pffB | 0.19 | 0.18 | 5.90 | 0.83 | HHsearch-2 | | EWLENPS------NTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLFTPELRSYLKTGHSQGLVTAVAIAET--DSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPS-ILEDSLENNVPSPMLSISNLTQEQVQDYVNKTNSHLPKQVEISLVNGAKNLVVSGPPQYGLNLTLRKAKAPSGLDQSRIASHLLVPASDLIKLVKSFDTFDGSDLRVLSSISERIVDCIIRLPVK |
7 | 2yfaA | 0.09 | 0.08 | 3.12 | 0.69 | Neff-PPAS | | ---------------GSHMGDIGQLNKDLTDLRIARLQYMIANGDDTAAANTLAKLDAFSKQQAYLATTFKSPENVKLLGELTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDARAEMTVQGADIVKRSDALYQIQLER |
8 | 4wvmB | 0.16 | 0.15 | 5.08 | 0.81 | HHsearch | | LYGAFFVFDSNKVDSTNVQEI-----QGQMEAVIKKIPSV-TGEETDITNSCEFDFFLTT-NPTTFEKTYQQLPQMVPMTVNLFTEVQKKLSDFQKICDDHMSKLQATIAKKLFAI--DEDESALLNLFEENLFNIESLNMWMEFEERNVLRSCMDILTKANQG-VLVFDVFLNVLNEFLDSPPSYDDIPETMREKAYLFRNLAKE--M-NNRCVHFVTARRELQWYDCELTLD- |
9 | 2yfaA | 0.09 | 0.08 | 3.11 | 0.51 | SP3 | | ---------------GSHMGDIGQLNKDLTDLRIARLQYMIANGDDTAAANTL---AKLDAFSKQQAYLATTFKSPENVKLLTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSSANEQAALRQLDAALADKRQLPSEDARLQQFENAVLAYRDAVRRDAVANITQGADIVKRSDALYQIQLER |
10 | 5cwqA | 0.11 | 0.09 | 3.26 | 0.78 | PROSPECTOR2 | | EELERESEEAERERGDLKELAEALIEEAAVQELARVACERGNSEEAERASE-------------------------------KAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVAC------CRGNSEEAERASEKAQRVLEEARKVSEEAREQGDALAVLALAEVACCRGNKEEAERAYEDARRVEEEARKVKESAEEQGDSEVKLAEEAEQLAREARWLEHHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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