Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MKNLLKILLIIAFANPVFASSMQMPDPASVTTTQIHAMSTNAQQDWIASLTANQYNMLSPDVQKWVMENTTDAQKQALGINQ |
1 | 3ugmA | 0.19 | 0.18 | 5.93 | 1.26 | HHsearch-2 | | GKQALETVPVVAIASVQR-LLPVLCQAHGLTPDQVVAIASNGKQVQRLLPVLCQDHGLTLAQVVAIASGLTQDQVVAIASNI |
2 | 3ugmA | 0.17 | 0.17 | 5.59 | 1.51 | HHsearch | | GKQAQRLLPVVALETVQ-RLLPVLCQAHGLTPAQVVAIASNIKQVQRLLPVLCQDHGLTLAQVVAIASGLTQDQVVAIASN- |
3 | 5cwbA2 | 0.15 | 0.15 | 4.95 | 0.75 | SPARKS-K | | EVICECVARIVAEIVEALKRSGTSEDVARVISEVIRTLSYEVIKECVQRIVEEIVEALSEDEINEIVRRVKSEVERTLKESG |
4 | 4n4gA1 | 0.09 | 0.09 | 3.29 | 0.57 | FFAS-3D | | MGTYLRFIVSRMKERAIDGKDSKHPMAVDVPTEKVNEGKYRSYEEFKADANTVIFYGADSEQADIARMLYKDTCHELDELQ- |
5 | 3ugmA | 0.17 | 0.15 | 4.83 | 0.67 | HHpred | | ---------KQALETVQ-RLLPVLCQAHGLTPAQVVAIASNIKQVQRLLPVLCQDHGLTLAQVVAIASGLTQDQVVAIASNI |
6 | 2kubA | 0.17 | 0.16 | 5.23 | 0.77 | MUSTER | | -ENLDKMISEAEVLNDMAARKLITLDAE--QQLELMKS-LVATQSQLEATKNLIGDPNATVADLQIAYTTLGNNTQALGLIK |
7 | 4oswA | 0.20 | 0.17 | 5.48 | 0.52 | CNFpred | | ---GKQALETVQRLLPVLCQ------AHGLTPEQVVAIAGKQALETVQRLLPVLAHGLTPEQVVAIASHD--GGKQALETVQ |
8 | 3ugmA | 0.20 | 0.20 | 6.27 | 1.24 | HHsearch-2 | | VQRLLPVLCAHGLTPDQVVALPVLCQAHGLTPDQVVAIASNGKQVQRLLPVLCQAHGLTPDQVVAIASNLTPDQVVAIASHD |
9 | 4gmqA | 0.15 | 0.15 | 4.95 | 0.72 | Neff-PPAS | | VKKNKRVLRGSVKEANYFVEGEASAATIDAVLNDVDLVITKIDADEIAALAGKLNGLTVADEIKNVWKEEVSRLVGAGKLKE |
10 | 3ugmA | 0.19 | 0.18 | 5.91 | 1.51 | HHsearch | | GKQALQRLLVVAIATVQRLL-PVLCQTHGLTPAQVVAIASHDKQVQQLLPVLCQAHGLTPDQVVAIAQALATVQRLLPVLC- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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