Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | FIIKKLKTIKASFIKSFFIKDIDESLETEQINFYLKRIINLEGYYYGNYDLTTIKEKYYTLIINNAF |
1 | 2px6B1 | 0.10 | 0.10 | 3.82 | 0.83 | SPARKS-K | | AETEAICFFVQQFTHNRVLEALLPKGLEERVAAAVDLIIKSHQGLDRQELSFAARSFYYKLRAAEQY |
2 | 3vibA2 | 0.12 | 0.12 | 4.18 | 0.58 | FFAS-3D | | WREKITAVLTEAVENQDLADDLDKETAVIFIKSTLDGLIWRWFSSGESFDLGKTAPRIIGIMMD--- |
3 | 5xbjA | 0.10 | 0.09 | 3.33 | 0.30 | HHpred | | -LTESVNNTFATLDQKKVND--DIKNTVDEINRIGEEIATINKQIEPTEHANELRDRRDELELT--- |
4 | 2izsA2 | 0.10 | 0.09 | 3.34 | 0.61 | MUSTER | | TLKERYQKIGDTKRATPIEVLCEN---FPEMATYLRYVRRLD--FFEKPDYDYLRKLFTDLFDRKGY |
5 | 5u1sA | 0.14 | 0.12 | 4.09 | 0.44 | CNFpred | | TVDHSLNSIYSLLKSHHMWGHIN--STVKQHLMIIVKLINNN-------ALGLASSEIIFLFNETNL |
6 | 1vt4I | 0.17 | 0.16 | 5.40 | 0.53 | HHsearch-2 | | HIGHHLKNIEHFRMLEQKIRHDSILNTLQQLKFYKPYICDNDPKYERL--VNAILDFLPKIEESKYT |
7 | 6nuwJ2 | 0.17 | 0.16 | 5.40 | 0.99 | Neff-PPAS | | TLIDALYKINDLLQQRLQILDDAIQEKTSELAEFENMVRSPSAGDNAIPGLLQIIQSYINLLEEN-- |
8 | 5h63A2 | 0.23 | 0.13 | 4.22 | 0.38 | HHsearch | | ------------------------DKKL--TTIYLENITKLEAQSADEVLLNGVKKSLEDVLKNNP- |
9 | 2px6B1 | 0.10 | 0.10 | 3.82 | 0.94 | SP3 | | AICFFVQQFTDMEHNRVLEALLPLKGLEERVAAAVDLIIKSHQGLDRQELSFAARSFYYKLRAAEQY |
10 | 4nq0A2 | 0.15 | 0.15 | 5.03 | 0.47 | PROSPECTOR2 | | AEQVTEKVIQAEFLVCDALRWVDQVPAKDKLKRFKHAKALLEKHMTTRPKLAQIQDDIDEVQENQQH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|