Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LKIEWKHLDVEGETCNRCYDTGENLNQEVKRLNRALQPQGIEVEWFETKLDDTKIPQSNTILFNGVPIEDILNIEVSQNYCDSCTTLLGNETYCRTIRYEGEEYEDIPAKAIRQAA |
1 | 1xg8A | 0.13 | 0.10 | 3.56 | 0.88 | SPARKS-K | | NAVVVYGAD---VICASCVNA-PTSKDIYDWLQPLLKRKNISFKYTYIDITKDL-----------------------TDHDLQFIEREQDELFYPLITMNDEYVGYIQTKQITRFI |
2 | 1xg8A | 0.16 | 0.12 | 4.03 | 0.61 | FFAS-3D | | -SNAVVVY-GADVICASCVNA-PTSKDIYDWLQPLLKRKNISFKYTYIDITKDLTDHDLQF------IERIE----------------QDELFYPLITMNDEYDGYIQTKQITRF- |
3 | 1uvzA | 0.18 | 0.11 | 3.66 | 0.35 | HHpred | | PVVVDFHAQW----CGPCKILGPRL-------EKMVAKQHGKVVMAKVDIDDHEVSAVPTVLANGDVVDKFVG--------------------------------IKDEDQLEAFL |
4 | 1nhoA | 0.20 | 0.14 | 4.43 | 0.74 | MUSTER | | VNIEVFT----SPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAINGVVRFV--------------GAPSREEL----------------FEAINDEM |
5 | 1zbtA | 0.11 | 0.06 | 2.20 | 0.61 | CNFpred | | IILEIRGAA-------GGDEAALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLK------------------------------------------- |
6 | 1t4zA | 0.08 | 0.05 | 2.03 | 0.44 | HHsearch-2 | | LLLQLFVD-T----RPLSQHI-------VQRVKNILAAVTVPISLQVINVADQRLVVTPALVKIGP--G----SR------------------Q-------VLSGIDLTDQLANQL |
7 | 1xg8A | 0.13 | 0.10 | 3.59 | 0.76 | Neff-PPAS | | QSNAVVVYGAD-VICASCVN-APTSKDIYDWLQPLLKRKNISFKYTYIDITKDLT----------------------DHDLQFIERIEQDELFYPLITMNDEYVADIQTKQITRFI |
8 | 1fo5A | 0.19 | 0.12 | 3.90 | 0.56 | HHsearch | | VKIELFTSPM----CPHCPAA-------KRVVEEVANEMPDAVEVEYINVMENGIMAVPTIVINGDVE--FIGAPTKE------------AL----------------VEAIKKR- |
9 | 3k7lA1 | 0.04 | 0.03 | 1.84 | 0.72 | SP3 | | VVVDYRHYKRDQ------PVIKRKVYEMINTMNMIYRRLNFHIALIGLEIWSNINEINVQSDVRAKKLLPRKRNDNGIDFNGTPGSICNPKTSAAVVQDYSSR----TRMVAITMA |
10 | 3zc4A | 0.12 | 0.11 | 4.00 | 0.47 | PROSPECTOR2 | | PVIKLRFYVVLRRFSIDPKQIKDVLSEALREFVSYTSSS---SSRSIVIYDDPKNPVTAQAPCLVVAKRDEIPQNFPSIYRYTIYKIDKSSEYCIVVNDKYATLITPNESVIKEFF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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