Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | RGIMTLTLLMLLSVMLLIFMLFDDDAIRLHSSLASLRQIYVSHNIELQQISQQQKRTACSEVPLNSTATVTRVAFEQAGFSDSNRHYIWCRRSALFKQSPKKGINEGRFSEMINEESVSLFQGKFGLPNDLVQEQSDYLYWLDKNQTEWTIAGDIYGIIVAEGNLHIAGKGRIRGAVISGGAISTDEKVSIAYRKATVTNLVQLYSQWQRAEKTWHDFT |
1 | 4psnA | 0.14 | 0.12 | 4.22 | 0.75 | SPARKS-K | | -----------LPTLRTGLVIAAGYADKVRRVLFAQLRDAIKDVAAAGNLNRVLFELLVNKLKADKL-DVVRIQIDYEVRDSQIQFDFSTLRVELWRRVPEEEIAPIVEDFARAAPRLLEEEIRFTVEKVGETDVGDVVYRIYRGS-------DVGALIVTPLN----GEALVRGAVVEPTPLLKRTRVQVEIDDFVRESVSRLFSEAQNVEKREAVRV |
2 | 4psnA | 0.12 | 0.10 | 3.58 | 0.72 | FFAS-3D | | -GLVIAAGYADKVRRVLFAQL---------RDAIKSGELSNKDVAAAGNLNRVLFELLVNKLKADKLD-VVRIQIDYEVRDSQIQFDFSTLRVELWRRVPEEEIAPIVEDFARAAPRLLEEEIRFTVEKVGETDVGDVVYRIYRGSD--------VGALIVT---PLNGEALVRGAVVEPTPLLLK-RTRVQVEADRIDDFVREFSEAQNVE------- |
3 | 3wp9A | 0.08 | 0.05 | 1.83 | 0.39 | HHpred | | ----------------------------------------ELAVSDMGIAYNDAAGRVPADLGTG-EIGGL--T---------LEPGVYKWSSDVN--IS------TDVT--FTMDDV--WIMQISGNVTLTGALAKNIFWQVAGYTALGTYASFEGIVLSKTLISVNTGTTVNGRLLAQTAVTLQKN-TINAPT------------------------ |
4 | 3licA | 0.09 | 0.09 | 3.29 | 0.72 | MUSTER | | YLSIEKRLYENLAQESSHSASRLQFLLEHAQANTQGLSDFIGLLADKDDIPEKLKTVLTNRIQRNPDFFGSAIAFKPNTFPNKKLFSPYVYRSGFNYLDIGADGYD------YTDGNWDWWSKAINQKAYFDEGAGNVLITYA---VPFGVQPDYFGVTTV--DLALPSRLVVLGRLIFHSDKEKVLAGWLDKQNIKNIAFATLLNDGQAGQASFVDDK |
5 | 3k07A | 0.05 | 0.04 | 1.86 | 0.57 | CNFpred | | GPLAFTKTYAMAGAALLAIVVIPILMGYLNRFLIRVYHPLLLKVLHWPKTTLLVAALSVLTVLWPLNKVGGEFLPQI----NEGDLLYMPSTLPG--------ISAAEAASMLQKTDKLIM--------------VPEVA-------------RVFGKTGKAETATDSAPEMVETTIQLKPQEQWRPGMTM---DKIIEELDNTVR------------- |
6 | 1vt4I | 0.11 | 0.10 | 3.66 | 0.68 | HHsearch-2 | | KSIAVSGTLRLFWTLLEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDVCLSYKVQCKMDFKIFWLNLK---NCNSPETVLEMLKLLYQDPNWTSRSSNIKLRIQAELRRL--------LKSKPYENCLLVLLNKQVTDFLSAATTTHISLDHHSMTLTPDKSLLLKYLDCRPQDLP-REVLTTNPRRLSIIAESIRDGLATWDNWKHVN |
7 | 3licA | 0.07 | 0.07 | 2.82 | 0.79 | Neff-PPAS | | LSIEKRLYENLAQESSHSASRLQFLLEHAQANTQGLSDFIGLLADKDDINNPEKLKTVLTNRIQRNPDFFGSAIAFKPNTFPNKKLFSPYVYRS---GSGFNYLDIGADGYDYTDGNWDWWSKAINQVGGFDEGAGNVLITYAVPFGV---QPDYFGVTTVDLALDRLPEAPSRLVVLDDSDKEKVLAGWLDKQNIKNIAFATLLNDGQAGQASFVDDK |
8 | 3wp9A | 0.08 | 0.05 | 2.20 | 0.60 | HHsearch | | PIALL-----LNCDEVTAGSINSPY-------------LLELAVSDMGIAYNDAAGRVPADLGTG-EI---------GG--LTLEPGVYKWSSDVN--IS------TDVT--FTMDDV--WIMQISGNVTLTGALAKNIFWQVAGYTALGTYASFEGIVLSKTLISVNTGTTVNGRLLAQTAVTLQKN-TINAPTEYEEA------------------- |
9 | 3licA | 0.09 | 0.09 | 3.43 | 0.66 | SP3 | | YLSIEKRLYENLAQESSHSASRLQFLLEHAQANTQGLSDFIGLLADKDDIPEKLKTVLTNRIQRNPDFFGSAIAFKPNTFPNKKLFSPYVYRSGSGFNYLDIGADGYDYTD----GNWDWWSKAINQVGGFDEGAGNVLITYA---VPFGVQPDYFGVTTVDLALRLPSRLVVLGRLIFHSDKEKVLAGWLDKQNIKNIAFATLLNDGQAGQASFVDDK |
10 | 3licA | 0.10 | 0.10 | 3.52 | 0.84 | PROSPECTOR2 | | ENYLSIEKRLYLAQESSHSASRLQFLLEHAQANTQGLSDFIGLPEKLKTVLTNRIQR-------NPDFFGSAIAFKPNTFPNKKLFSPYVYRDIGADGYDYTDGNWDWWSKAINQVG-----GYWSKAYFDEGAGNVLITYA----VPFGVQPDYFGVTTVDLALDRIAPSRLVGRLIFHSDKEKVLAGWLDKQNIKNIAFATLLNDGQAGQASFVDDK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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