Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MFTKTLSVVLLTCALFSGQLMAGHKGHEFVWVKNVDHQLRHEADSDELRAVAEESAEGLREHFYWQKSRKPEAGQR |
1 | 5jqzA | 0.12 | 0.11 | 3.70 | 0.80 | SPARKS-K | | LKALIEIAKAIWKALWANSLLLEATS------RDTERMRQWAEEARKIYKEAEKIIDRADEIVEEAKKRHD----- |
2 | 5jqzA | 0.14 | 0.12 | 4.03 | 0.51 | FFAS-3D | | MLKALIEIAAIWKALWANSLLATSRGDTERMRQWAEEARKIYKEAEKIIDRADEIVEEAKKRH------------- |
3 | 1y7911 | 0.18 | 0.12 | 3.87 | 0.30 | HHpred | | -----------------------QSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAELANDIYLNGE-LFA- |
4 | 3gjxA | 0.18 | 0.18 | 5.97 | 0.64 | MUSTER | | NFIQNLSLFLCTFLKEHGQLLEKRLNLREALMEALHYMLLVSEEETEIFKICLEYWNHLAAELYRESPFSTSASPL |
5 | 1r3sA | 0.06 | 0.05 | 2.37 | 0.51 | CNFpred | | ASHQLLRILTDALVPYLVGQVVA--GAQALQLFESHGHLGPQLFNKFALPYIRDVAKQVKARLREA--GLAPVPMI |
6 | 6an0A1 | 0.14 | 0.13 | 4.47 | 0.32 | HHsearch-2 | | IKNEKDKALINYTKKFDKAYL------TDIRVSSDEITAAIALVSDELIQAIQMAASNIEKFHASQKENKNIIETT |
7 | 5jqzA | 0.13 | 0.12 | 4.13 | 0.85 | Neff-PPAS | | ANSRMLKALIEIAKAIWKALWANSLLLEATSRGDTERMRQWAEEARKIYKEAEKIIDRADEIVEEAKKRHD----- |
8 | 4ka7A1 | 0.16 | 0.16 | 5.22 | 0.50 | HHsearch | | HVRPGIRALLQHLEAELEELEK-SVEPRLTVVWGMINHLKAVKDTPELRAAIEDVQPEKVKFQLRLGQSKP-IYN- |
9 | 3u2bC | 0.13 | 0.12 | 4.12 | 0.65 | SP3 | | HIKRPMNAFMVWSQIERRKIMEQSPD---MHNAEISKRLGKRWKKDSDKIPFIQEAERLRLKHMADY---PDYKYR |
10 | 5wahA | 0.15 | 0.14 | 4.88 | 0.38 | PROSPECTOR2 | | DTGKREKQLQQWKNNLKNDVDNTILSHE--QKNEFKTKIDETNDSDALLELENQFNETNRLLHIKQHTLKQSDTKV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|