Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | LTVTGALIGALWAWLAPPIHGVVALTKKGERVKAFLGNESDHFFVSAFLIAGMLGVLAVVAAMLLWQWRAHRGPVMVAALAIGAAAGAGSAAAVGALLVHWRYGAIDIAGAPVSPEHRVHYVIEAPAVFFGHSPLQVAATILLPAATAALVYALMAVSTQRDDLGA |
1 | 4xu4A | 0.12 | 0.10 | 3.61 | 1.03 | SPARKS-K | | LFLLGAVAALIGDHSHVVTGTTVYHTDAVPFVWSSPF-----------WFPILVGAATASLAELRQALGGVAAVVGTYVTTALVHPGAACGVVIAVIGPAVEIALVQLGV------------FAYHPDSDGLFGVAPFLAPLYFAFGVVAALLGELAVARRPQL-- |
2 | 6an7D | 0.14 | 0.11 | 3.93 | 0.69 | FFAS-3D | | LSLILELVGIWWAFLWPILLVLI---YTLIFSHLIGTVYAYSIYLSSGIFPWFFFSNSLSRITGIFTEKKFRLEVFPVVVIISELINYLIGISLVTLISFITLGFEGIKYF----------------------YLFPVALYLMIVYSFSIGMVLGTLNVFFRDI-- |
3 | 5ezmA3 | 0.14 | 0.07 | 2.48 | 0.39 | HHpred | | -LIGMAIVAACGLLASPVVA-TL-----N------ANHIPNSFYRAYAVWVAVAFVVMLLGIAVARLLRRGV-LPSVAVYAMGMYLGFTVALLGHETVGRPA---------------------------------------------------------------- |
4 | 3wdoA | 0.11 | 0.11 | 3.90 | 0.80 | MUSTER | | IAILATTGIALTIWVVPSTHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCV----GLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLSPAGYKGT |
5 | 3rkoB | 0.15 | 0.13 | 4.23 | 0.99 | CNFpred | | WATLMLLGGAVGKSAQL-------------PLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAARVLAYSTMS-----------------QIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHE |
6 | 5ezmA3 | 0.14 | 0.08 | 2.66 | 0.89 | HHsearch-2 | | QLIGMAIVAACGLLASPV-----VAT-LN-----A-NHIPNSFYRAYAVWVAVAFVVMLLGIAVARLLRRGV-LPSVAVYAMGMYLGFTVALLGHETVGRPAS--------------------------------------------------------------- |
7 | 5t77A2 | 0.08 | 0.08 | 3.07 | 0.87 | Neff-PPAS | | TLFFTIPSMVGLIFLSTPIIRFFYEHGAF-------TSKDTLITSKILIAYTLGLPFYGIYSTISRSYHAIKIILDIIFGLKYGPIGVALATSIAGIIGVLYLLFSVKTFPIKDFLKISLNSLIMLFVIYLTDFTDNEFWFLIQILIGILVYLIFSSIFYRDLIRR |
8 | 5ezmA3 | 0.14 | 0.08 | 2.66 | 0.70 | HHsearch | | QLIGMAIVAACGLLASPV-----VAT-LN-----A-NHIPNSFYRAYAVWVAVAFVVMLLGIAVARLLRRGV-LPSVAVYAMGMYLGFTVALLGHETVGRPAS--------------------------------------------------------------- |
9 | 1qcdA | 0.12 | 0.11 | 3.82 | 0.64 | SP3 | | ----------------PPNSFLLDDSHAKKSYRWYSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFARGFLFGPMIAVELEIPFADKNAGLSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVALSGLQLVEASDAVVVEMVSIL--SIPFLKA |
10 | 5jkiA | 0.07 | 0.07 | 2.75 | 0.69 | PROSPECTOR2 | | MYKPVSLFLFFLAAAIHTNAVQSADEAISKAAVLIRQPWLNEVMTGITHLGASSFLLPLIVIIGAGMFFYRKTWDGLLMLLVFGTDRLLNK------VLKEWIERVRPDFAPLVHESSFYFLVKHLPFLSKHKKMVYIIAGVIAVLVGLLLFFLVKGFDEKIKRFR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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