Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | DEFSQNLGIKKKDRTIFKMKQSENENEKCLVLENGSFNSPEPWFVIDENDEIHTLLSLQSLKNILESLKQSQKENFELRLEKAIYQQIPVDFNDVWTVAMDEIKQKAQNGTMEVSIDLEKLISKIKQEHPNLFVDMQ |
1 | 4r04A3 | 0.16 | 0.15 | 4.88 | 0.67 | SPARKS-K | | YELKKLNNLD--EKYLISFEDIKNNSTYSVRFINK--SNGESVYVETEKE----IFSSEHITKEISTIKNSINTLNAAFFIQSLIDYSSDVLNDLSTSVKVQLYAQLFSNTIYDSIQLVNLISNAVNDTINVLPTIT |
2 | 6eqoA5 | 0.07 | 0.04 | 1.51 | 0.68 | FFAS-3D | | -------------------------------------------------------IAVPVAMELLGQALPEHAGLIRSEVAGLLDGEVTVERSDVMRGVGKALTAIASGEAAGGAMTPRQ-AAQLRIA--------- |
3 | 3d55C | 0.14 | 0.07 | 2.47 | 0.37 | HHpred | | ---------------------------------EQVNTDHQPVRITSRAG-DAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKA---GHSFTKSVDELREM------------------------------- |
4 | 1td6A1 | 0.17 | 0.15 | 4.80 | 0.70 | MUSTER | | NQFVNHLALKKHFASYKELREAFND-------------------YHKHNGDELTTFFLHQFDKVMELVKQKDFKTAQSRCEEELAA-LPKPLVSFFQSLLQLVNHDLLEQQNLASLPAAKIIELVLQDYPNMIHYLL |
5 | 3j1eA | 0.14 | 0.12 | 3.99 | 0.49 | CNFpred | | --------------SLIEERKVG--EDKMVFVEGA--KNPKSISILIRGLERLVDETERALRDALGTVADVIKD-VEIEIAKKLRKYAPQLAVEAYANALESLVSILI---ENAGFDPIDLLMKLRSTHKWYGIDLY |
6 | 4lb8A | 0.15 | 0.09 | 3.18 | 0.66 | HHsearch-2 | | -------------------------------------------EIEVINDGTIKFKDVESYENALLKVSASTSEQVS------FLNSLSFKSQ-ILQEADGELDKICNQAA--DKAEFDVLYEKYKHKYGDVFFTID |
7 | 2wb7A2 | 0.10 | 0.09 | 3.50 | 0.64 | Neff-PPAS | | DQDVKNLIDLYKKKDREKINATTKAINSLQEKIDEAEQLLAKAKGNNENAIEYAQGAIDEYKAAINDLQKAAQQD-DYQFLNYLNAAKKHEAGDYYVNAARKALNGDLEQAKIDAEKAKEYSNLAKEYEP------- |
8 | 3g5oA | 0.07 | 0.04 | 1.83 | 0.46 | HHsearch | | ------------LMRILPISTI---KGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIRESIAEADASGRTYGEDEIRA--------------------------EFGVPRR------- |
9 | 1td6A1 | 0.17 | 0.15 | 4.80 | 0.59 | SP3 | | NQFVNHLALKKHFASYKELREAFND-------------------YHKHNGDELTTFFLHQFDKVMELVKQKDFKTAQSRCEEELAAYLPKPLVSFFQSLLQLVNHDLLEQQNLASLPAAKIIELVLQDYPNKYLLPK |
10 | 1td6A2 | 0.12 | 0.11 | 3.83 | 0.53 | PROSPECTOR2 | | VKFQALNQIPGFQGEQVEYFNSKLKQKFTLTLGEFEIAQQPD--------------AKAYFEQLITQIQQLVNAEFANEIIDAFLVSYPVPLAQLAAKIYEYVSQIVLNEAVNLK---DELIKLIVHTLYEQLDRPV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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