Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MAVITSLAEKRQEKQLRYERKMLRELSLEKLRAKVLEHFVPFYHMYRIFPSVVEEGCIDLAIEAYLLGAHYSRFGYYGEPADSVRQRCAQEEKYLVDTLFDFLCFWGNIDDDIRSESLYYACEQYIGSWWTEGFERGKKRRRLKLH |
1 | 4uosA | 0.13 | 0.13 | 4.50 | 0.81 | SPARKS-K | | --GDNEEVKKMLEKMIEEIKKMLEKAMLEKMIKEIKKMLEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILLGVDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKE |
2 | 2bj4B | 0.09 | 0.09 | 3.38 | 0.85 | FFAS-3D | | MGLLTNLADRELVHMINWAKRVFVDLTLHDQVHLLECAWLEILQGKVEGMVEIFDMLLATSEEFVCLKSILNSGVYTTLKSLEEKDHIHRVLDKITDTLIHLMAK--AGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSMK-- |
3 | 2fji12 | 0.05 | 0.03 | 1.58 | 0.23 | HHpred | | ------------------SKTWYMGSQAQQIADTLDEYLLDIKPQNSVLFVNFIDNVIGETIIKFLTALSF-EHSFKNKN-----NKFLEAMKRDFEIFYQLFVKVLD-GNESKDTLITQN------------------------- |
4 | 2iagA | 0.11 | 0.10 | 3.73 | 0.69 | MUSTER | | QLPHYSPSDEKARMKLTLLHRELQAL-TEAMYTNLHAVLLGDAT--EAGSGWHEMGLLDFSYSFLLRAGYLTLYGIALPRTHESQAQDRVHSADVFHTFRQLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLL----PARLARRAH |
5 | 4c9bB | 0.12 | 0.12 | 4.08 | 0.65 | CNFpred | | -------QRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGLLSRSVLQAQTHVYAALVAIINSKFPQIGELKRLILNFRKGYRRNDKQLCLTASKFVAHLINQN--AHEVLCLEMLTLLLERPSVEVAIGFLKECGLKLT |
6 | 5it7OO | 0.20 | 0.07 | 2.18 | 0.38 | HHsearch-2 | | EDVVAKLEEKRKARSAEYYLKKKA---YNAVVANK-S--ATVG-------------------TEV--SEKLAALGY---------------------------------------------------------------------- |
7 | 3kkdC | 0.09 | 0.09 | 3.40 | 0.78 | Neff-PPAS | | -DLITDTFALFVERNAEALSAFWSSVEDLQEAAVLADDPGARGSLVERIVELAVQYVQVQLTERREHLLAEQAFRQEALLNPRLRELADAHQRILSLGAVHFFQVLGSGQPEQDAKVLTSIILQEYQGLVDGVEQLAVDERAILRR |
8 | 1ov9B | 0.21 | 0.07 | 2.18 | 0.32 | HHsearch | | -EITKTLLNIR------SLRAYARELTIEQLEEALDKL-TTVVQERK---E--AEAEEIAA------------------------------------------------------------------------------------- |
9 | 5a2gA | 0.08 | 0.07 | 2.75 | 0.78 | SP3 | | PYSTGDSRPLIQAMLKELEAGRLETVPYYDLAAAYNRVSPAIARAGGYIAVGFTDHAKTIPV---MVGTMPLPFNKETISEAELDEILDKRFQGHGKELKTVFAEAYPGKSPVDLLTFRGPTKEFVRSLAAAG------------G |
10 | 2d4uA | 0.08 | 0.08 | 3.22 | 0.69 | PROSPECTOR2 | | GPLGSGGENFTVLQTIRQQQSTLNGSALLQTRNTLNRAGIRYMIGSGSTVAELMESASISLKQAEKNWADYEALPRDPRQSTAAAAEIKRNYDIYHNALAELIQLLGAGKFDQPTQGYQDGFEKQYVAYMEQNDRLHDIAVSDNNA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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