Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MTLSLILACLWVVAANVLAMVPSRDNHWSRAYLLIAAGIPLVGYVTYENGPWWGLGVLFAGMSMLRWPVIYLGRWLR |
1 | 6cfwD | 0.15 | 0.14 | 4.83 | 1.25 | MUSTER | | DMIIQFIVLGGIILSSVLMIV-TRD-LLVAVLASAAMSLLLSLEFYMLHAPDVAIAEAAVGAGVVTALVMYAISKTE |
2 | 6a2jA3 | 0.17 | 0.17 | 5.56 | 1.30 | SP3 | | SYIVVLLLFVWIIVAAVHAITSYKDQKGWISCLIFITLQALSGIMIVYSELGFALAHSFFIACLFGVLCYFLLLIAR |
3 | 2vpyC2 | 0.14 | 0.14 | 4.86 | 0.96 | SPARKS-K | | MAGLFPLTALVLALGLAALLKSALFPLRVLAGASLLLALLYPLTLLLEEAGFWYGLFLLLGLGTFPWAGLLAAAGLR |
4 | 3rkoJ | 0.12 | 0.12 | 4.13 | 0.65 | FFAS-3D | | MEFAFYICGLIAILATLRVI--THTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYAGAIMVLFVFVVMMLN |
5 | 6adqD | 0.17 | 0.10 | 3.43 | 0.23 | HHpred | | --IGVMHIGGLLSAAFLLVMMRGNHVGHVEDWFLIGFAAVIVALVGRNWW--------------------------- |
6 | 6cc4A3 | 0.10 | 0.09 | 3.40 | 1.18 | MUSTER | | --VGLIGLIVVKVLAPGFYSR--QDIKTPVKIAIVTLILTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLYWQLRK |
7 | 3rkoB | 0.09 | 0.09 | 3.42 | 0.87 | CNFpred | | LHLVGIVGAVTLLLAGFAALVQT---DIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVI |
8 | 1l7vA1 | 0.08 | 0.05 | 2.04 | 0.56 | HHsearch-2 | | LPGCALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLLKA---------------------------- |
9 | 6a2jA3 | 0.10 | 0.10 | 3.81 | 0.95 | Neff-PPAS | | VLLLFVWIIVAAVHAITSYKDQKQIFWGWISCLIFITLQALSGIMIVYSEALGFALAHSFFIACLFGVLCYFLLLIA |
10 | 6adqD | 0.19 | 0.14 | 4.61 | 0.41 | HHsearch | | MPIGVMHIGGLLSAAFLLVMMRGNHVGHVEDWFLIGFAAVIVALVGRNWW--------------LRR---RGWIR-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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