Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | HEIVTLQLGQRANYLATHFWNLQESYFTYNEKEETPVDHDVHFRPGIGADGSETYTPRTVIYDLKGGFGTLRKYNALYELSEDATGQGLWDGQEVVQKQPPILQSDYQKSLD |
1 | 5flzC | 0.20 | 0.17 | 5.45 | 1.71 | SPARKS-K | | GEIITLQAGQCGNHVGKFLWSQLAKEIGTDSSTERDDDTKPFFREN----CRNKFTPRAIMMDSEPSVIADNTFRGFFDPRN-----------TWVASDGASAGNSWANGYD |
2 | 1tubA1 | 0.17 | 0.14 | 4.71 | 1.51 | FFAS-3D | | RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQ---------LITGKEDAANN------- |
3 | 6gj4B | 0.20 | 0.16 | 5.16 | 1.75 | HHpred | | REIVHIQAGQCGNQIGAKFWEVDEHGIDPTGSYLQLERINVYYNEAT----GNKYVPRAILVDLEPGMDSVGPFGQIFRPDNFSGAGNNWAKGHYT---------------- |
4 | 3hkeD1 | 0.16 | 0.16 | 5.32 | 1.67 | MUSTER | | REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQINVYYNEATGNKYVPRAILVDLEPGTMDSGPFGQIFRPDNQSGAGNNWAKGHYTEGAELVD--SVLDVVR |
5 | 5w3jB | 0.25 | 0.18 | 5.54 | 1.48 | CNFpred | | REIIHISTGQCGNQIGAKFWEVIEHGLDFNGTYHGHDDLNVYFNEAS----SGKWVPRSINVDLEPGIDAVRAIGNLFRPDNYI---------------------------- |
6 | 6gj4B | 0.22 | 0.20 | 6.21 | 1.69 | HHsearch-2 | | REIVHIQAGQCGNQIGAKFWEVDEHGIDPTGSYLQLERINVYYNEAT----GNKYVPRAILVDLEPGMDSVGPFGQIFRPDNFSGAGNNWAGHYTEG------A-ELVDSLD |
7 | 3hkeD1 | 0.18 | 0.18 | 5.82 | 2.79 | Neff-PPAS | | REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPSGAGNNWAKGHYTEGAELVDSVKESESCD |
8 | 2btoB1 | 0.19 | 0.14 | 4.62 | 2.24 | HHsearch | | NNTIVVSIGQAGNQIAASFWKTLEHGIDPLGQTAPRGNWSSFFSES----SSGSYVPRAIMVDLEPSIDNVATSGSLFNPANLI------SRTEG----------------- |
9 | 5flzC1 | 0.21 | 0.18 | 5.69 | 0.69 | PROSPECTOR2 | | GEIITLQAGQCGNHVGKFLWSQLEHAIGTDGSTERDDDTKPFFREN----CRNKFTPRAIMMDSEPSVIADNTFRGFFDPRN-----------TWVASDGASAGNNLLEALT |
10 | 1tubA | 0.19 | 0.13 | 4.30 | 1.12 | SAM | | RECISIHVGQAGVQIGNACWELLEHGIQPDGQGGGDDSFNTFFSET----GAGKHVPRAVFVDLEPTIDEVGTYRQLFHPE------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|