Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | MFGGFAPPQLSEEEIRQAEAEANFTIQQAVATAVALYLSPFVIDAVSK |
1 | 2x3mA1 | 0.21 | 0.21 | 6.62 | 1.03 | SPARKS-K | | WIMGWRTPNASEKKMEFMYWYTRTYLEEAIADALARGMAGLAFDWVAS |
2 | 3ifmA | 0.16 | 0.15 | 4.88 | 1.30 | MUSTER | | ---GVIDTSAVESAITDGQGDMKAIGGYIVGALVILAVAGLIYSMLRK |
3 | 3ifmA | 0.16 | 0.15 | 4.88 | 1.11 | SP3 | | ---GVIDTSAVESAITDGQGDMKAIGGYIVGALVILAVAGLIYSMLRK |
4 | 2yxyA1 | 0.11 | 0.10 | 3.77 | 0.94 | SPARKS-K | | --EQKRYSEMTKEELQQEIAMLTEKARKAEQMGMVNEYAVYERKIAMA |
5 | 4xydA1 | 0.12 | 0.10 | 3.71 | 0.46 | FFAS-3D | | VSPNFLSEILPFNIVRMLHTNSLIVWLLLGFMGAAYFVIPEES----- |
6 | 1lghB | 0.18 | 0.15 | 4.75 | 0.20 | HHpred | | ----RSLSGLTEEEAIAVHDQFKTTFSAFIILAAVAHVLVWVW----- |
7 | 2ifoA | 0.11 | 0.10 | 3.73 | 1.11 | MUSTER | | ----SGGGGVDVGDVVSAIQGAAGPIAAIGGAVLTVMVGIKVYKWVRR |
8 | 1rqgA | 0.26 | 0.17 | 5.15 | 0.55 | CNFpred | | -----------------VRTGTTVNISLQIVKALGILLEPFLPDASEK |
9 | 3jcuI | 0.27 | 0.15 | 4.48 | 0.31 | HHsearch-2 | | ----------------------MLTLKLFVYTVVIFFVSLFIFGFLSN |
10 | 3ifmA | 0.15 | 0.12 | 4.23 | 0.80 | Neff-PPAS | | -------TSAVESAITDGQGDMKAIGGYIVGALVILAVAGLIYSMLRK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|