Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | YREIITKAVVGKGRKFTQSSHTLAPKNRPTSILGCWVINHEYKAKKSGSNVEVDGRYDINIWYSYNNNTKTEVWTETVSYKDNIKLRYKDEDSIGDDYEVIVRVLQQPNCLECTISPNGNKTIVQVERELLAEVIGETKVCVAVNPKGCDDEDEFDLDVDDDEFEDLDPDFI |
1 | 6beaA1 | 0.11 | 0.09 | 3.37 | 0.81 | SPARKS-K | | STVSTDPVTLNTEKTTLDQDVVINGDNK--------ITAVTIETSDSDKDLNVTGGHDITATSTVNQDFVEGVKVSGNK-NVVINA---------TDSTITAQGEGTYVRTAMVIDSTGD---VVVNGNFVAKN-EKGSATGISLE--ATTGNNLTLNGTTINAQGNKSYSN |
2 | 2q4nA | 0.13 | 0.09 | 3.22 | 0.59 | FFAS-3D | | ------------------------PPVHPFVLLGTW----RGQGEGEYPTIP-SFRYGEEIRFSHSGKPVIAYTQKTWKLESGAPHAESGYFRPRPDGSIEVVIAQSTEVQKGTYNVDEQSIKLKSDLSREFELVDGKLSYVVRSTTTNP---------------------- |
3 | 6nzsA | 0.12 | 0.09 | 3.05 | 0.31 | HHpred | | -----------------HDNAVFTGPTGNDE------------VRRSSFDLQVAQEYDAFTYMSIPRSGKLTMSWSSFEYAKDVWVSLRTGQTITSADQVQIRPSSYN--FEKQLVD-ADTVKIKVPYRFSVEFEPQLSMMIFAEPKLRGEQ-------------------- |
4 | 3pddA | 0.11 | 0.10 | 3.77 | 0.74 | MUSTER | | --TIDS-ERFEAGKD-INISATVKSKTPVSKV--EFYNGDTLISSDTTATAKIAGAYNLKAVAVLSDGRRIESPVTPVLVKVTVKLTAPKSNVVNEFLKITATASDDGKISRVDFLVDGEVIGSDYEYEWKA---GNHEISVIAYDDDAASTPDSVKIFVKQARLEHHHHHH |
5 | 3jx8A | 0.16 | 0.12 | 4.08 | 1.36 | CNFpred | | LKELNTVGSFIISKPTKVNRMEINMAGSGNVELRGPVKGYKLECNMAGGNIIAKDIQLDNLSCSLASSGEIEVIGT----VDRASFNVAG------SGEIKAFDCQ-ARKAECNIAS-SGEISVYATQILDANIVGSGEIHYKGDP-------------------------- |
6 | 6go1A1 | 0.16 | 0.06 | 2.13 | 0.46 | HHsearch-2 | | NTTLYTKDL-RDSFKEVRYNIW-RTADGPESK--QT-----F-TSQEKDRLPLRGEFQIETVGIKEDNTETNLVTSKITF-------------------------------------------------------------------------------------------- |
7 | 4mboA2 | 0.08 | 0.07 | 2.78 | 0.91 | Neff-PPAS | | --NSPSVTEHTNVKTNVRSRIMKLDDERQTETYITQINPEGKEMYFASGLGNLYTIIGSDGSPVNLLNAEVKILKTNSNLTDSMDQNYDSPEF----EDVTSQYSYTNDGSKITIDWKTNSISSTTSYVVLVKIPQSGVLYSTVSDINQTYGSKYSYGHTN----------- |
8 | 6go1A1 | 0.12 | 0.05 | 1.85 | 0.50 | HHsearch | | ---TQGVITWDP-YEYNAQNTTLYTRDSFKEVRNIWRTDKQTFTSQEKDALPLRGEFQIETVGIKEDNTETNLVTSKITF-------------------------------------------------------------------------------------------- |
9 | 2d62A2 | 0.10 | 0.07 | 2.58 | 0.70 | SP3 | | --------------------------------------N-FLDATITDDGFLDFGEFKLKLLQDQFEVLEEENVGKEVIFPEDVHDASFTHIDVPEENTVKATVDILGGEKIVHLRRGNISFTAKFPKESKVR-EG-DEVSVVFDKKIHIFRKDTEKAIF------------ |
10 | 3pddA | 0.09 | 0.09 | 3.34 | 0.67 | PROSPECTOR2 | | MVTIDSGERF-EAGKDINISATVKSKTPVSKV--EFYNGDTLISSDTTAPYTAKGAYNLKAVAVLSDGRRIESPVTPVLVKKLTAPKSNVVAYGNEFLKITATASSDGKISRVDFLVDGEVIGSDREAPYEYEWKGNHEISVIAYDDDAASTPDSVKIFVKQARLEHHHHHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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