Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | TEMNLCNIHFHKNAEHKGGEFTLYAGNGDGEGYHTGYRYSGKLSDAELAPVKNKVCPSKHGDLKPGDTIEVHYVHSTAQVEPGPTLGACLSDANKNPQLRVETQVYVLVNDKNAYDFEELTEHEVQDGVHQAVAIPTNTGKPIQYMGSTTGPGYNEKGSPFQVTWSVRPKVAKVNIES |
1 | 1jczA | 0.21 | 0.15 | 4.63 | 1.01 | SPARKS-K | | SRYSATQLHLHHGSEHT----------VSGQHFA----------------------------------AELHIVHYNSDLYPD--ASTASNKSE---GLAVLAVLIEMG--SFNPSYDKIFSHVKYKGQNIEELLPERTAEYYRYRGSLTTPP----CNPT-VLWTVFRNPVQISQEQ |
2 | 3jxhC | 0.14 | 0.10 | 3.44 | 1.01 | CNFpred | | --FKAEKVEFHWGHSNGS--------------AGSEHSING------------------------RFPVEMQIFFYNPDD--FDSFQTAISE---NRIIGAMAIFFQVSPR-DNSALDPIIHGTFLDPFVLRDLLPASLGSYYRYTGSLTTP----PCSE-IVEWIVFRRPVPISYHQ |
3 | 3iaiA | 0.22 | 0.15 | 4.78 | 0.97 | SPARKS-K | | REYRALQLHLHPGSEHT---------------------------------VEGHRFP-----------AEIHVVHLSTAFAR---VDEALGRP---GGLAVLAAFLEEG-PEENSAYEQLLSRIAEEGSDISALLPSDFSRYFQYEGSLTTPP----CAQ-GVIWTVFNQTVMLSAKQ |
4 | 1keqA | 0.24 | 0.16 | 5.08 | 0.67 | FFAS-3D | | NHYRLKQFHFHWGSEHA----------VDGHTY----------------------------------PAELHLVHWNSTKYEN------CKKASVGENGLAVIGVFLKLGAHHQA-LQKLVDVQVAMGPFDPSCLMPACRDYWTYPGSLTTPPLAE-----SVTWIVQKTPVEVSPS- |
5 | 3fe4B | 0.25 | 0.17 | 5.41 | 0.49 | HHpred | | -VYIAQQMHFHWGGEISGSEHTV-----D------GIRHV----------------------------IEIHIVHYNSKY---KSYDIAQDAPD---GLAVLAAFVEVKNYPENTYYSNFISIKYLTGLDVQDMLPRNLQHYYTYHGSLTTPPCTEN-----VHWFVLADFVKLSRT- |
6 | 4es8A1 | 0.13 | 0.13 | 4.45 | 0.72 | MUSTER | | LPDDLMNF-WEVSADGSSGRFFSKGATDAKDVKKPGWREHNEVKDSYIKIDKQSIAARYKTSTTAP--YSVAFKVNTKSLIKDHDYKITFEQGQIASGITVDYRIGSAFNKTTDDSFKISDESKYIEGEEQGFKQREQGDKTISFRTLKEGPKVEKKPGDLDVEFK---NLKIIDVT- |
7 | 4lu3A | 0.18 | 0.13 | 4.20 | 1.01 | CNFpred | | --YVAAQLHLHWGQK--------------GSPGGSEHQINS-----------------------EATFAELHIVHYDSDS--YDSLSEAAE----PQGLAVLGILIEVGET-KNIAYEHILSHTSVPPFNLRELLPKQLGQYFRYNGSLTTPPC-----YQSVLWTVFYRRSQISMEQ |
8 | 3iaiA | 0.18 | 0.17 | 5.47 | 0.98 | HHsearch-2 | | RFQSPVDIRPQLAAFSPARGFQLPLPENNGHSVQPGLEMALGPGRERALQLHLHWGGSEH--TVEGFPAEIHVVHLSTAF---ARVDEALGR---PGGLAVLAAFLEEGPEEN-SAYEQLLSRLEVPGLDISALLPSDFSRYFQYEGSLTTPP----CAQ-GVIWTVFNQTVMLSAKQ |
9 | 3jbmA | 0.13 | 0.12 | 4.10 | 0.99 | Neff-PPAS | | -----------TNDVHLSGMSRISQAVLPAGTGTDG----YVVVDATIVPDLLPRLGHAARIFQAVETLEFEIQPMCPANTGGGYVAGFLPDPTDNDHTFDALQATRGAVVAKWWESRTVRPQYTRTLLWTSSGKEQRLTSPGRLILLCVGNNTDVVNVSVLCRWSVRLSVPSLETPE |
10 | 5hpjA | 0.24 | 0.15 | 4.56 | 0.92 | HHsearch | | KTFELKQFHFHTPSENYLK----------------GKQY----------------------------PLEAHFVHATDK-----------------GELAVVAVMFDFGPRSN-NELTTLLASIPKEALNPADLLPR-DREYYRFNGSLTTPP----CSE-GVRWFVMQEPQTSSKA- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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