Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | TKLGLDANKVKLHMRYNPRLFGVEEEMNVCDDEDVFIYATSAKNNRRSVLVVEEISKPPEQEQLPEQLSRVGKSSVGKNYTELNSEEDEMRVDDGALIVLLEEEQGTQHQLEAIVEDHG |
1 | 4b9gA | 0.03 | 0.03 | 1.91 | 0.74 | SPARKS-K | | RIIPVDPKLNSQLYTVEMTIPAGVSAVKIVPTDSQIGKLVNVNNPDQNMNYYIRKDSGAGKFMAGQKVKENTSYTFSAIYTGGEYPSSGTYAGHLTVSFYSNDNKQRTEIATKNFPVST |
2 | 5h05A3 | 0.12 | 0.08 | 2.66 | 0.40 | FFAS-3D | | ------------------------ERTNIVANETVYIDHKQADDD--ALIYMVSTTADQDTVE-----LKASDIASDGQLVDLLTGK-VHSAINGEYQISLAPFEA------------- |
3 | 3idaA2 | 0.14 | 0.13 | 4.34 | 0.25 | HHpred | | ----IHDRDDVLCYSTEVLTTGVSARLFVAVDTDFTAKLVDVFPDGRAIALCDGIVRMRYAGE-IYEVIMVQVSSSNFPKYDRNSNGVIEEMCTAVNRIHRGPEHPSH-IVLPIIKR-- |
4 | 4aq1A6 | 0.13 | 0.12 | 4.08 | 0.69 | MUSTER | | TPVGLDIVAPSEIDVNAPNTASTADVDFI-NFESVEIYTLDSNGN-----RLKKVTPTATTLVGTNDYVEVNGNVLQFK---GNDELTLLTSSSTVNVDVTAD--GITKRIPVKYINSA |
5 | 1dykA | 0.05 | 0.03 | 1.54 | 0.65 | CNFpred | | ---------LTIELEVRTEA---ESGLLFYMARADFATVQLRN---GFPYFSYDLGSGDTSTMIPTKINDGQWHKIKIVRVK------------QEGILYVD----------------- |
6 | 3nvnB1 | 0.11 | 0.09 | 3.30 | 0.38 | HHsearch-2 | | ARPRPGSSFSKLLLPYRE---GAALGLLLTGWTFDRGACEVRPLGNLSRNSLRNGTEVVSCH---PQG-----TSVYG-----------TVVM-NRTVLFLGTGDGQLLKVFYKLVVKN |
7 | 2bklB2 | 0.08 | 0.08 | 3.03 | 0.90 | Neff-PPAS | | --YWRQGESGQEKVLLDPNGWSKDGTVSLGTDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTG |
8 | 4ohvA3 | 0.17 | 0.09 | 3.03 | 0.42 | HHsearch | | CKLVIEPS-ADIKHHLFAFS-RSTK-----ADENVFCLVTEVDLEKRTSIL-----CPQ-R-TIPSKVLV--FSDITH--LD------------------------------------- |
9 | 4aq1A6 | 0.12 | 0.11 | 3.86 | 0.59 | SP3 | | TPVGLDIVAPSEIDVNAPNTASTADVDFI-NFESVEIYTLDSNGN----RLKKVTPTATTLVGTNDYVEVNG------NVLQFKGNDELTLLTSSSTVNVDVTADGITKRIPVKYINSA |
10 | 4mboA2 | 0.05 | 0.05 | 2.36 | 0.51 | PROSPECTOR2 | | NSPSMKLDDERQTETYITQINPEGKEMYFASGLGNLYTIIGSDGSLNAEVKILKTNSKNLTDSMDQNYDSPEFEDVTSQYSYTNDGSKLVKIPQSGVLYSTVSDINQTYGSKYSYGHTN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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