Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | DEKKQLHVSEKLKESERRNDSLQDKVETLERELQMAEENQELVILDAENCKAEVETLKTQIELMTERLKDLELDLVTIRSEKENLLKQLQEKQGQASELDTLLSSLKNLLEEKEREKIQTKEEAKSAVEMLQTQLRELTE |
1 | 3na7A | 0.11 | 0.11 | 3.89 | 1.17 | SPARKS-K | | LDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSELNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQIIFK |
2 | 2tmaA1 | 0.14 | 0.14 | 4.61 | 1.67 | FFAS-3D | | -LDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEK----MEIQEIQLKEA-- |
3 | 3na7A1 | 0.12 | 0.10 | 3.56 | 1.30 | MUSTER | | -------LEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALEL------------- |
4 | 3na7A1 | 0.11 | 0.09 | 3.36 | 1.22 | Neff-PPAS | | -EPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALEL-------------------- |
5 | 6egcA | 0.24 | 0.23 | 7.14 | 1.12 | SPARKS-K | | ---TRTEIIRELERSLREQEELAKRLKELLRELERLQRESSD--EDVRELLREIKELVEEIEKLAREQKYLVEELKRQNEIIRELERSLREQEELAKRLKELLRELERLQRESDEDVRELLREIKELVEEIEKLAREQKY |
6 | 6gapA | 0.09 | 0.09 | 3.31 | 1.65 | FFAS-3D | | -ESRVSALEKTSQIHSDTILRITQGLDDANKRIIALEQSRDDLVASVSDAQLAISRLESSIGALQTVVNGLDSSVTQLGARVGQLETGLAELRVDHDNLVARVDTAERNIGSLTTELSTLTLRVTSIQADFESRISTLER |
7 | 3dtpB2 | 0.11 | 0.09 | 3.38 | 1.13 | MUSTER | | ------------------SAEREKEMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNERLEDEEEMNAELTAKKRKLEDECSELKRDIDDLELTLAK |
8 | 2tmaA | 0.17 | 0.17 | 5.63 | 0.85 | CNFpred | | AEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAERSVTKLEKSIDDLED |
9 | 6f1tX2 | 0.18 | 0.11 | 3.71 | 0.78 | HHsearch-2 | | ------------------------------------------------QHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEV----RLSYRQLQGGGGGGGG |
10 | 3u0cA | 0.10 | 0.09 | 3.46 | 1.15 | Neff-PPAS | | -EKSLTALTNKITAWKSQQQARQQKNLEFSDKINTLLSETEGLTRDYEKQINKLKNADSKIKDLENKINQIQTRLSEL----DPESPEKKKLSREEIQLTIKKDAAVKDRTLIEQKTLSIHSKLTDKSMQLEKEIDSF-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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